Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4642 ATGTCAGACCCTAGTTATGCAATTGCAAAGGCTGTGGCTGCTACAGCCGGAGCTATGTTACTTATTGCAGGGATTTTCTTTTACTTGTTCCAAAAATATGCACTTGCTACGTACCCCAAGAGGAACAAATTTCCATATGATTATGAGGGTATAAGGAAACTTGTTGGCGGCAATGTGAAGGGACTAATTATGGAAGAAAATGGGGTTGATGTTCTTTACATGTTGGACATTGGAGGCAAAGAGTTGGTAACGGGATTCACAAGTAGTAGCTTCGATCCTAGTTTTGAAGATCATGATTTAGAACAAGAAAAGAGAATTGATGTTGTGGTCCAAAGATCCAAAATATCAAAGCCTAAGGTGATTCTAGAACCTCCACTTCCTCCACTATCACAAGCTTCACCAAGAATTGATCAAGAGAAGAAAACTCAACCACCACCTCCACCTCCGCCTCCACCTCTTCCACCACCGCCTCCTCTCTCTCCACTACCACCGCCGCCGGCACCAAAGGCAGTGCCACCTGGTCCACCTCCACCTCCAAAGGCTGGTGGCTTCAGTTCATCATCCTTGAAGCCCCCACCTGTGCCTAAAGGGAAACCAAGCAGCCAAAGAACCAAAGAGGGTATTCTAGGAGAGAGCTCAAGAGAGAAGAAGGGTGCCGGCGAAACAAGGCTTAAGCCTCTACATTGGGACAAAGTTATGGCTAATGTTGATCATTCAACAGTGTGGGATCAGATCAACGACGGTTCTTTTAGGGTTGATGATGAGCTCATGGAAACACTCTTTGGTTATTCAACCACCAACAAAACTCAAGAAAGAAACAAAAGTGTCTCAACTATGACAAAGTCCAACTCCAACACACCAACTCAAACATTCATTTTGGAGCCAAGAAAATCCCAAAACACTGCAATTGTTCTAAGATCACTTGCCACCTCTCGCAGGACTATCTTGGAAGCACTACTTGACGGCCAAGGACTAAGCCTAGAGACGCTCGAAAAGCTCACCAAAATAGCTCCCACACCAGAAGAAGAATCCAAGATCATGCAGTTCAATGGCAACCCTGAAAAGCTTGCAGACGCCGAGTCTTTCCTCTACCACATCCTCAAAGCAGTTCCAACTACATTCCGTCGTCTCAAAGCCATGCTTTTCAGGTATACTTATGACTATGAAGTTCTTCAACTGAAAGAATATTTGCAAGCACTCGAAATGGGTTGCCGGGAACTGAGAACTAGTGCTTTGTTCCTGAAGCTTCTTGAGGCAATTCTCAAAGCTGGGAACAGAATGAATGCGGGAACATCAAGAGGGAATGCAAAAGCATTCAATTTGAGTGCTCTTAAAAAACTCTCTGATGTGAAAAGCACAGATGGAAAGACTAGTTTGCTTCACTTCATAGTGGAACAAGTGGTTCAATCAGAAGGTAAAAGAAAAGCTATGTACCAAAGAATCAATGGCGAAAAAGAACACATAATGCTTGGTTTTGCAGCCCTGGATGGGTTAAGAGATGAGGTATCTGAAGCAAAGAAAGCAGCGAGTATAGAGTATCAAACTTTTATCACAATGTATTCCAATCTCAATTCTCATGTTATTGAAATCAAGGAGATTGTAACAAAATGTTGTGGCAGCAGCAACACTAGCGTTGATGGGTGTGGTGGGTTTCTAAAGGAAATGAAAGGGTTCATAGAGGAATGCGAGGAAGAGCTTAAGGTTGTGAAAGAAGAGCAAACAAGGATCATGGATCTTGTGAGGAAAACTAATGGTTATTATCTACCAGGAACATTTTTATCTAAAGATAACAGCAATTTGACGAACCCCTTTGAATTGTTTGTGATTGTGAAAGATTTTGTTGATATGGTGGATCAGGCTTGTGTGGAGCTTAAAAAGAAGATGGAAAAGAAGGGTGTTGTAGGAACAGCAGAAGGTGGATTGGAACCACTACCTTTGTCTCCTTCAAAGAGGGTACCACCTAGATTTCCCAACTTTGATTTATATTTTTCGTCAAATGTGTTGGAATCTACTTCCTTCAGCCAATCAGAAGATGATTCCTGA 2043 0.4263 MSDPSYAIAKAVAATAGAMLLIAGIFFYLFQKYALATYPKRNKFPYDYEGIRKLVGGNVKGLIMEENGVDVLYMLDIGGKELVTGFTSSSFDPSFEDHDLEQEKRIDVVVQRSKISKPKVILEPPLPPLSQASPRIDQEKKTQPPPPPPPPPLPPPPPLSPLPPPPAPKAVPPGPPPPPKAGGFSSSSLKPPPVPKGKPSSQRTKEGILGESSREKKGAGETRLKPLHWDKVMANVDHSTVWDQINDGSFRVDDELMETLFGYSTTNKTQERNKSVSTMTKSNSNTPTQTFILEPRKSQNTAIVLRSLATSRRTILEALLDGQGLSLETLEKLTKIAPTPEEESKIMQFNGNPEKLADAESFLYHILKAVPTTFRRLKAMLFRYTYDYEVLQLKEYLQALEMGCRELRTSALFLKLLEAILKAGNRMNAGTSRGNAKAFNLSALKKLSDVKSTDGKTSLLHFIVEQVVQSEGKRKAMYQRINGEKEHIMLGFAALDGLRDEVSEAKKAASIEYQTFITMYSNLNSHVIEIKEIVTKCCGSSNTSVDGCGGFLKEMKGFIEECEEELKVVKEEQTRIMDLVRKTNGYYLPGTFLSKDNSNLTNPFELFVIVKDFVDMVDQACVELKKKMEKKGVVGTAEGGLEPLPLSPSKRVPPRFPNFDLYFSSNVLESTSFSQSEDDS* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4642 680 SMART it6_source 214 632 IPR015425 -
Amo05g4642 680 SUPERFAMILY Formin homology 2 domain (FH2 domain) 147 631 - -
Amo05g4642 680 Gene3D Formin, FH2 domain 235 633 IPR042201 -
Amo05g4642 680 MobiDBLite consensus disorder prediction 140 182 - -
Amo05g4642 680 ProSiteProfiles Formin homology-2 (FH2) domain profile. 214 643 IPR015425 -
Amo05g4642 680 Coils Coil 552 579 - -
Amo05g4642 680 PANTHER FORMIN-LIKE PROTEIN 5 675 - -
Amo05g4642 680 PANTHER FORMIN-RELATED 5 675 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Amo05g4642 680 MobiDBLite consensus disorder prediction 208 224 - -
Amo05g4642 680 Pfam Formin Homology 2 Domain 218 617 IPR015425 -
Amo05g4642 680 MobiDBLite consensus disorder prediction 120 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4642 Amo-Chr5 119550439 119553232 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4642 8 657 FH2 protein (formin) Gene Family AT1G70140 39.972 9.82e-145 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4642 - - gmx:100819989 686.797