Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4620 ATGATGATGAATCCAAGCGACTTGCAGCGGTTTGCGGTGTCAAATCGATTCACAAGGTTCCCAAAATCGTTCTCCCTGCGGAAGAAGGTGCCATGGTGGTACAAAATACTTGACCCACGGTCAAGATTCATCGCAAGATGGAACCGGACCTTCCTTTATGCGTGCATTGTGGCACTGTTCCTTGACCCTCTCTACTTCTACTATCCCATAACGGGTGACAAGGCTTGCATGCAAACCGATTGGTACCTGGGCGTTGTCGTCACCTTCGCCAGAACCGTGGCCGATCTTTTCTTCCTCTTCCACATGGTCCTCAAATTCCGGACGGCCTACGTTAACCCTCTCACTCGTGTTTATGGCCACAAGGAGCTCGTCACGGATCCCCACCTCATTGCCAAAAGGTACCTCAAGCATGATTTCATCATCGATCTACTTGCTACCCTTCCTTTGCCTCAGATTGTGATTTGGTTCGTGATTCCGGCAGTGAAAGGGTCAACTGTAGCACAAGGAAATCACACAATATCCCTGATTGTCCTCATTCAGTATGTTCCCCGATTGTTTCAGATTTTTCCTCTTCAACGTCGAATCTTAAAGACTAGTGGGCTTATAACCAAAACTGCATTGGCTGGGGCTGTGTACAATCTTTGTTTCTACATGTTGGCCAGCCATGTTTTGGGAGCATCATGGTATGTGTCATCGATCCAAAGACAATTTGAGTGTTGGAGAATAACTTGTAGGAGGGAGATGAATAGAACACACTCTCCATCTTGCAAACCAGCGTATCTTGATTGCAATCTTTTGGATGATCCAGCAAGACAAGCATGGTTTAAGAGAACCAGTGTGCTTGCTGACTGTGATGCTCTCAATGACAAGAATGACTTTCAATTTGGAATGTTTTCTGATGCTTTCACCGACCATGTTTCTTCCTCCACCTTTTCTCAAAAGTATTTTTATTGCCTTTGGTGGGGCCTCAAAAATTTAACATCTTATGCTCAAGGTCTTAATACGAGCACTTACGTTGGTGAAACCGTATTTTCAAGTTTCATTTGCATCGCAGGTTCAATCCTCTTTGCGCATCTCATTGTCATTAAAATTAACAATTACATGTTTTTTGCTATTATTAAAAAGAATTATCTGCAATCTTCAACTGCAAGACTTGAAGAATGGAGACTGAAACAAAAGGATACAGAAGAGTGGATGAATCATAGGCAACTTCCACCGGAACTTCAACAACGCATTCGCAGGTTTGTTCAATATAAATGGCTTGCCACAAGAGGCGTAGATGAAGAAGCAATTTTGCGTGATTTGCCTATTGATCTTCGACGCCAGATTCAAAGGCATCTTTGTCTTGACATTGTTCGTCGGGTTCCTTTCTTCGGTCAAATGGATGATCAACTCCTAGATGCCATATGTGAACGTCTTGTTGCATCCTTAAACACAAAAGACACATACATTGTAAGGGAAGGTGATCCAGTGAGAGAAATGCTCTTCATCATTAGAGGACAACTTGAGAGTTCAACCACTGATGGTGGRAGAACAGGGTACTACAACTCTATCATTCTTAGACCAGGTGATTTCTGTGGTGAAGAGTTGCTGACGTGGGCCTTGATGCCCACCTCAAACCTCAGCCTTCCAGACTCTACTAGAACTGTCAAGACTGTTACTGAAGTCGAAGCGTTTGCTCTCAGAGCTGAGGATCTAAAGTTTGTTTCGAATCAATTCAAGCGTCTACATAGCAAGAAACTCCAGCATGCTTTTAGGTACTATTCCCATCAATGGAGGGCTTGGGGGGCTGCCTTTATACAGACTGCTTGGAGACGCTATCGTAAGAGAAAACTGACAATGGAGTTGTTACAAAAAGAGAACTTGTACTACACCAATATCGAGCAAGAAGATGATGAAGGTGAAGAACAAAGGGTAGGAGGGAGTTCATCAAGTAGTGGAAACCGCGCACAGATTTCAACTACCGTTTTGGCATCTAGGTTTGCTGCAAACACAAGAAGAGGTGCCGCTAAGAAGATTGCAATACCTGATAGTGATAGTTTGAAGATGCCCAAAATGTTCAAGCCAACAGAACCTGATTTCTCAAATTTCCAAGATGAAAATTAA 2106 0.4335 MMMNPSDLQRFAVSNRFTRFPKSFSLRKKVPWWYKILDPRSRFIARWNRTFLYACIVALFLDPLYFYYPITGDKACMQTDWYLGVVVTFARTVADLFFLFHMVLKFRTAYVNPLTRVYGHKELVTDPHLIAKRYLKHDFIIDLLATLPLPQIVIWFVIPAVKGSTVAQGNHTISLIVLIQYVPRLFQIFPLQRRILKTSGLITKTALAGAVYNLCFYMLASHVLGASWYVSSIQRQFECWRITCRREMNRTHSPSCKPAYLDCNLLDDPARQAWFKRTSVLADCDALNDKNDFQFGMFSDAFTDHVSSSTFSQKYFYCLWWGLKNLTSYAQGLNTSTYVGETVFSSFICIAGSILFAHLIVIKINNYMFFAIIKKNYLQSSTARLEEWRLKQKDTEEWMNHRQLPPELQQRIRRFVQYKWLATRGVDEEAILRDLPIDLRRQIQRHLCLDIVRRVPFFGQMDDQLLDAICERLVASLNTKDTYIVREGDPVREMLFIIRGQLESSTTDGGRTGYYNSIILRPGDFCGEELLTWALMPTSNLSLPDSTRTVKTVTEVEAFALRAEDLKFVSNQFKRLHSKKLQHAFRYYSHQWRAWGAAFIQTAWRRYRKRKLTMELLQKENLYYTNIEQEDDEGEEQRVGGSSSSSGNRAQISTTVLASRFAANTRRGAAKKIAIPDSDSLKMPKMFKPTEPDFSNFQDEN* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4620 701 MobiDBLite consensus disorder prediction 666 701 - -
Amo05g4620 701 SUPERFAMILY cAMP-binding domain-like 386 582 IPR018490 -
Amo05g4620 701 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED 12 696 - -
Amo05g4620 701 ProSiteProfiles cAMP/cGMP binding motif profile. 457 531 IPR000595 -
Amo05g4620 701 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 12 696 - -
Amo05g4620 701 SMART cnmp_10 457 585 IPR000595 -
Amo05g4620 701 Pfam Ion transport protein 47 367 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Amo05g4620 701 MobiDBLite consensus disorder prediction 628 651 - -
Amo05g4620 701 Gene3D Jelly Rolls 455 575 IPR014710 -
Amo05g4620 701 SUPERFAMILY Voltage-gated potassium channels 38 368 - -
Amo05g4620 701 Gene3D Helix hairpin bin 383 448 - -
Amo05g4620 701 CDD CAP_ED 457 588 IPR000595 -
Amo05g4620 701 Gene3D - 48 368 - -
Amo05g4620 701 Pfam Cyclic nucleotide-binding domain 480 567 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4620 Amo-Chr5 119129818 119135329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4620 13 694 Ion Channels AT3G48010 62.113 0.0 875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4620 K05391 - gmx:100783672 1142.1