Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4619 ATGAGAGAAAGAATAGAGGAGTTGAAGAAGCAGAAGCAGCATGTCATGATGGAGTCAAAAAACAACAACAATAATACAATAATGTGCAAAAATATGGACACAAAATTGCCACTGCTTGAGCTGAGAGAATTTGGCTCCGGCATAGAAGTTGTGTTGGTTTGTGGATTGAGAAACAAGACCTTCATGTTATATGAAGTTATTAATGTTCTTGAGGAAGAAGGTGCTGAAGTTGTTACTGCAAGCTTCTCAACTGTGGGGGACAAAATATTTTACATTGTTCATGCTCAGGATAAAATAGCAAGAGTTGGGGTAGAAACATCAAGGGTGCATGAGAGGCTTCAGAAGTTTATTGCTCCAATAGAAATGTGGGACTAA 375 0.384 MRERIEELKKQKQHVMMESKNNNNNTIMCKNMDTKLPLLELREFGSGIEVVLVCGLRNKTFMLYEVINVLEEEGAEVVTASFSTVGDKIFYIVHAQDKIARVGVETSRVHERLQKFIAPIEMWD* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4619 124 PANTHER FACTOR, PUTATIVE-RELATED 1 119 - -
Amo05g4619 124 Coils Coil 5 25 - -
Amo05g4619 124 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 119 IPR015660 GO:0003700|GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4619 Amo-Chr5 119104990 119107212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4619 35 117 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 40.476 1.39e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4619 - - gmx:100809363 160.999