Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4608 GTGGTTTGTACTAATAAGAAGAATATGCATTGGTTGAAGCAAAAAGGGAACGGGAATGGGAGCATGAGGTCGTCAGGGAGGAGGCTGTCCCTTGGGGAGTACAAGAGGGCGGTGTCATGGTCGAAGTACTTGGTGTCGGCGGGTGCGGCGATCAAGGGAGAAGGCGAAGAGGAATGGAGTGCTGACATGTCTCAGCTTCTCATTGGTTCCAAGTTCGCCACGGGAAGGCACAGCAGGATCTACAGAGGTGTATACAAGCAGAAGGATGTGGCCATCAAGCTTGTAAGCCTGCCTGAGGAGGATGAGGATCTTGCTTCTTTTCTTGAGAAACAATTCACTTCTGAGGTCTCCTTGCTCCTCCGCTTGCGCCATCCCAATATCCTCACTTTTATTGCAGCCTGCAAGAAACCTCCTGTCTTTTGTATAATTACCGAATACTTAGCCGGCGGATCATTGAGAAAATATCTGCATCAGCAACAATCAAATTCAGTTCCACTTGAAATTGTTCTGAAATTAGCCCTTGACATTGCACGGGGAATGCAATATCTTCACTCTCAGGGGATACTTCATAGGGATCTCAAATCAGAAAATCTGCTTCTGGGGGAAGATATGTGTGTAAAAGTAGCAGATTTTGGTATCTCTTGCTTGGAATCTCAGTGTGGTAGCGCGAAAGGATTCACCGGAACTTACCGGTGGATGGCTCCGGAAATGATCAAAGAAAAGCATCACACTAAGAAAGTTGATGTCTATAGTTTTGGCATAGTTCTATGGGAGATTTTAACAGGACAGACACCATTTGAAAACATGACACCAGAGCAAGCTGCATTTGCAGTTTCCCACAAGAATGCAAGGCCACCATTGCCATCTGAATGTCCATGGGCACTAAGTGACCTAATAAACAGATGCTGGTCAAGCAATGCAGATAAGAGGCCACATTTTGATGAGATAGTTCCCATTTTGGAGAACTACACAGAATCATTGGAGCAGGATCCCGAGTTCTTCACAACATACAAACCACGCCCTTCTAATAACACAACAATTCTTGGATGCATACCTAAGTGCAATACTCGCCATAAATCTACTGCTTGCAAAGCTTAA 1098 0.4526 VVCTNKKNMHWLKQKGNGNGSMRSSGRRLSLGEYKRAVSWSKYLVSAGAAIKGEGEEEWSADMSQLLIGSKFATGRHSRIYRGVYKQKDVAIKLVSLPEEDEDLASFLEKQFTSEVSLLLRLRHPNILTFIAACKKPPVFCIITEYLAGGSLRKYLHQQQSNSVPLEIVLKLALDIARGMQYLHSQGILHRDLKSENLLLGEDMCVKVADFGISCLESQCGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFGIVLWEILTGQTPFENMTPEQAAFAVSHKNARPPLPSECPWALSDLINRCWSSNADKRPHFDEIVPILENYTESLEQDPEFFTTYKPRPSNNTTILGCIPKCNTRHKSTACKA* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4608 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Amo05g4608 365 SMART serkin_6 66 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4608 365 Gene3D Transferase(Phosphotransferase) domain 1 149 347 - -
Amo05g4608 365 PANTHER SERINE/THREONINE-KINASE HT1-LIKE PROTEIN 7 342 - -
Amo05g4608 365 ProSiteProfiles Protein kinase domain profile. 66 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4608 365 PRINTS Tyrosine kinase catalytic domain signature 228 238 IPR001245 GO:0004672|GO:0006468
Amo05g4608 365 PRINTS Tyrosine kinase catalytic domain signature 247 269 IPR001245 GO:0004672|GO:0006468
Amo05g4608 365 PRINTS Tyrosine kinase catalytic domain signature 291 313 IPR001245 GO:0004672|GO:0006468
Amo05g4608 365 PRINTS Tyrosine kinase catalytic domain signature 144 157 IPR001245 GO:0004672|GO:0006468
Amo05g4608 365 PRINTS Tyrosine kinase catalytic domain signature 182 200 IPR001245 GO:0004672|GO:0006468
Amo05g4608 365 SUPERFAMILY Protein kinase-like (PK-like) 56 319 IPR011009 -
Amo05g4608 365 Pfam Protein tyrosine and serine/threonine kinase 68 319 IPR001245 GO:0004672|GO:0006468
Amo05g4608 365 CDD STKc_MAP3K-like 68 320 - -
Amo05g4608 365 PANTHER SERINE-THREONINE PROTEIN KINASE 7 342 - -
Amo05g4608 365 Gene3D Phosphorylase Kinase; domain 1 56 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4608 Amo-Chr5 118864536 118869601 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4608 39 329 MAP Kinase Kinase Kinase AT1G62400 63.390 1.18e-135 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Amo05g4608 PK_Tyr_Ser-Thr 7.4e-67 CL0016