Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4603 ATGGGGAGCTCGGAGAAGGTTGTTGCTGTGATCATGGTGGGTGGACCCACCAAAGGGACCAGATTTCGGCCTCTTTCATTCGCCATTCCGAAACCCCTTATCCCTTTGGCTGGCCAGCCAATGGTTCATCATCCTATATCAGCTTGTAAGAGGATACCCAATTTGGCACAAATATATCTGATTGGATTCTATGACGAGCGGGAATTTGCACTATATGTCTCTTCGATTTCAAATGAGCTGAAATTACCAGTAAGATACTTGAAGGAGGATAAACCACATGGTTCAGCAGGTGGTCTTTACTACTTTAGAGATATTATCATGGAGGACAGTCCGTCACATATCTTCCTCCTAAATTGTGACGTCTGCTGCAGTTTCCCGTTAGCATCCATGCTTGAAGCACATATAAAGTATGGTGGTATGGGGACAATGTTGGTAATCAAGGTTTCGGCTGAATTAGCCAGCGAGTTTGGGGAGTTGGTTGCGGATCCAACAACTAATGAATTGCTGCATTATACTGAGAAGCCTGAGACTTTTGTTAGTGACTTAATAAATTGTGGAGTCTATATTTTCACGCCCGATATTTTTTCTGCCATCCAAGATGTATCCACAAATCGAGAAGGCAGAGCCAATCTACGTCGTGTCTCCAGCTTTGAAGCACTCCAATATGCCACAAGGAGTATTCCTCCGGATTTTGTAAGACTGGATCAAGATATATTGTCACCCCTAGCTGGAAAGAAGCAACTATATACATATGAGACAAATGATTTCTGGGAGCAAATCAAAACTCCAGGAATATCCCTGAAATGCTCAGAGTTGTATCTTGCACAATATCGGCATACTTCACCTCATCTTTTGTCCAGTGGAGATGGTACAAGAAGTGCGACCATTGTTGGTGATGTATATATTCATCCATCTGCGAAAGTTCATCCATCTGCAAAGATTGGTCCCAATGCTTCTATCTCGGCAAATGTTCGTGTGGGTGCTGGTGCCAGGTTAATCAACTGTATCATCTTGGATGATGTTGAAATTAAGGAAAATGCAGTAGTTATAAATTCTATTGTTGGATGGAAGTCATCAATTGGAAGATGGTCACGAGCGCAGGCTGAAGGTGACTACAATAAAAAGCTTGGTATAACCATTCTAGGAGAAGCTGTGACAGTGGAAGATGAGGTGGTGGTGGTTAACAGCATTGTTCTTCCCAATAAGACTCTTAATGTCAGTGTACAAGAAGAAATCATCTTATAA 1245 0.4233 MGSSEKVVAVIMVGGPTKGTRFRPLSFAIPKPLIPLAGQPMVHHPISACKRIPNLAQIYLIGFYDEREFALYVSSISNELKLPVRYLKEDKPHGSAGGLYYFRDIIMEDSPSHIFLLNCDVCCSFPLASMLEAHIKYGGMGTMLVIKVSAELASEFGELVADPTTNELLHYTEKPETFVSDLINCGVYIFTPDIFSAIQDVSTNREGRANLRRVSSFEALQYATRSIPPDFVRLDQDILSPLAGKKQLYTYETNDFWEQIKTPGISLKCSELYLAQYRHTSPHLLSSGDGTRSATIVGDVYIHPSAKVHPSAKIGPNASISANVRVGAGARLINCIILDDVEIKENAVVINSIVGWKSSIGRWSRAQAEGDYNKKLGITILGEAVTVEDEVVVVNSIVLPNKTLNVSVQEEIIL* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4603 414 CDD M1P_guanylylT_A_like_N 9 273 - -
Amo05g4603 414 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 2 276 IPR029044 -
Amo05g4603 414 SUPERFAMILY Nucleotide-diphospho-sugar transferases 7 356 IPR029044 -
Amo05g4603 414 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 5 414 - -
Amo05g4603 414 Gene3D Hexapeptide repeat proteins 285 411 - -
Amo05g4603 414 Pfam Nucleotidyl transferase 9 204 IPR005835 GO:0009058|GO:0016779
Amo05g4603 414 PANTHER ADP-GLUCOSE PYROPHOSPHORYLASE FAMILY PROTEIN 5 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4603 Amo-Chr5 118821110 118827654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4603 19 200 Eukaryotic Initiation Factors Gene Family AT2G34970 22.477 2.93e-06 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g4603 05 118821110 118827654 Amo15g1491 15 110375809 110398238 hybridization