Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4600 ATGGACACATACCTAATAAGCACCTTGGCAATTGGAATCGTTTCTCTAATCATCTTCCTCTGCTTATTTCTTCTTCCTCCTTTCAAAGCTAGCCACCTTAAAGAACCCCCAATTGTTCATGGTGCATGGCCTATACTCGGTCATCTTCCATTGTTGAGTGGCTCATCAGAGCCACTCCACATGGCTTTAGGTTCCATGGCAGACAAGTACGGACCCCTTTTTACCATCAAGCTTGGCGCCACAAAAACCATAGTACTCAGCAACTCTGAAATGGCTAAAGAATGCTTCACAAAAAATGACATGGTTGTCTCGTCTCGCCCCAAGCTTGTCGCCATTGAAAACCTTTCCTACAACTTCACAATGGTGGGGTTCGCGCCATACGGTTCGTATTGGCGCAAACTTCGCAAGATAGTGACCTTGGAGCTCTTGTCTAATCGCCGCATCGAGCTACTAGCCCACATTCGCGTCTCTGAAGTTGGAGCTTCTATAAAGGAACTCGTTAGTGTTTGGTTGGATAATAAAAATAGTAACAATGATGAGTATGTATTTGTAGAGATGAAAAAGTGGTTTTCAGAATTGGCATTCAACACGGTTCTTGGAATGATTGTGGGGAAGAGATACTTTGGTTCCATGGACGCCGCGAGTGAGGAGAAGACGAAAAGATGCTTGAAGACCATGAGAGAGTTTATGCATCTCGTGGCGGTGTTCACTGTTGGAGATGCCATTCCTTATCTCAGGTGGTTGGATTTGGGGGGTCACGAGAAAGCCATGAAAAAGATCGCTAAGGAGTTAGATGAGATCTTGAGTGAATGGTTGGAAGAGCACCGCAAAATCAGAGTGTTGGATGAACAAGACTTCATGGGCATGATGCTTTTAATTCTCAGGGACAATGATATTGATGGGATTAATGTTGATACCATTATCAAAGCCACAACATTGGCAATGATTGTTGGAGGAGTTGATACCGTCACTGTTACCCTTACATGGGCAATGTGTTTGCTTATGAGAAATCCTAATATACTAGAGAAAGCAAAAGAAGAACTTGACACCCAAGTTGGAAACCAGAGATGCATAAAAGAGTCGGATATAAACAAATTGGTATATCTTCAAGCAATAGTCAAAGAGACACTACGGTTGTGTCCGGCAGCCCCTCTTTCAGCGCCGCGCGAATTCACCCAAGATTGCACTTTAGGCGGATACCATATTAAGAAAGGAACTCAGTTAATTACAAATATCTGGAAGATTAACACCAATTCTCACAGTTGGCCATATCCATTGGAGTTCAAACCAGAAAGGTTTCTTACAACTCACAAAGATGTTGATGTTAGGGGTCACCATTTTGAGTTGTTACCATTTGGAAGTGGTAGAAGAATGTGTCCAGGAGTATCTTTTGGCCTTCAAATGGTTCACTTTACTCTGGCTAGCTTTTTACATTCCTTTGAAATCTTGAATCCATCTTCAGAACCTGTTGATATGACTGGAATTCTTGGATTGACTAATGTTAAAGCTACTCCACTTGAGGTTCTGGTTAAACCACGTTTCTCTCCTGACTGTTATGACTTATAA 1566 0.424 MDTYLISTLAIGIVSLIIFLCLFLLPPFKASHLKEPPIVHGAWPILGHLPLLSGSSEPLHMALGSMADKYGPLFTIKLGATKTIVLSNSEMAKECFTKNDMVVSSRPKLVAIENLSYNFTMVGFAPYGSYWRKLRKIVTLELLSNRRIELLAHIRVSEVGASIKELVSVWLDNKNSNNDEYVFVEMKKWFSELAFNTVLGMIVGKRYFGSMDAASEEKTKRCLKTMREFMHLVAVFTVGDAIPYLRWLDLGGHEKAMKKIAKELDEILSEWLEEHRKIRVLDEQDFMGMMLLILRDNDIDGINVDTIIKATTLAMIVGGVDTVTVTLTWAMCLLMRNPNILEKAKEELDTQVGNQRCIKESDINKLVYLQAIVKETLRLCPAAPLSAPREFTQDCTLGGYHIKKGTQLITNIWKINTNSHSWPYPLEFKPERFLTTHKDVDVRGHHFELLPFGSGRRMCPGVSFGLQMVHFTLASFLHSFEILNPSSEPVDMTGILGLTNVKATPLEVLVKPRFSPDCYDL* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4600 521 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4600 521 PRINTS E-class P450 group I signature 370 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4600 521 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4600 521 PRINTS E-class P450 group I signature 411 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4600 521 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4600 521 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4600 521 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4600 521 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4600 521 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4600 521 SUPERFAMILY Cytochrome P450 42 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4600 521 Pfam Cytochrome P450 42 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4600 521 Gene3D Cytochrome P450 27 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4600 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Amo05g4600 521 PANTHER CYTOCHROME P450 82A2 6 520 - -
Amo05g4600 521 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4600 521 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4600 521 PRINTS P450 superfamily signature 371 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4600 521 PANTHER CYTOCHROME P450 82C3-RELATED 6 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4600 Amo-Chr5 118717703 118720009 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4600 1 519 Cytochrome P450 AT4G31940 45.849 1.83e-172 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4600 - - aip:107643961 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g4600 05 118717703 118720009 Amo15g1514 15 111193530 111195696 hybridization