Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4597 ATGGATTCAGTCTTAAATTACCTAAACCCCACCGCCATAATCGGAATCCTTTCTCTAATAATAGTCTTGCTCTATATACTTCTCTTTCGTCCCTTCAAACCTGGTGGTAACCTCAAAGAACCTCCCATGGCAGCTGGTGCGTGGCCTATACTGGGTCACCTTCCATTGTTGCGCGGTTCACAGCCACTCCACACGACTTTAGGCACCATGGCTGATAAATATGGACCTCTTTTCACCATCAAGTTCGGCGCTACAAAGACCATAGTACTCAGCAACTGGGAAATGGCCAAAGAGTGTTTCACCATAAACGACATGGCCATTTCGTCTCGCCCCAAAACCGTTGCAATTGAGAACCTTTCTTACAACTTCGCCGTTTTCGGTTTAGGACCGTACGGTCCATACTGGCGCGAGCTTCGAAAGATCGTAACGTTAGAGCTACTCTCGAACCGCCGCATAGAGCTACTAGGCCACGTTCGCGTCTCTGAAGTTCAAGCTTCCATTAACGAGCTCTATAGTCTTTGGTCCAGAAAGAAAAACAAGGAGTCTTATAACTCTGATGATGACGGTTATGTGTCGGTGGAGATGAAAGAATGGTTTTCGCAACTGACCTTCAACTCGGTTCTTAGAATGATTGCTGGAAAGAGATACTTTGGTGGTGCTACCGCGGATGCTGTGTCGACGGCCGTCGGCGAGGAAAAGGCGAAGAAGTGTTTAAAATTAATTGAAGATTTTATGCATCTTTTGGGGTTATTTACTGTGGGAGACGCTATTCCTGCGCTCAGGTGGATGGATTTGGGAGGCCATGAGAGAGCCATGAAAAGAACTGCTAAGGAATTGGACAGTGTTTTGAATGAATGGTTAGAGGAGCATAGAAGAAGTTTCGGTGAAAAGGCTACCAGTGAACGTGACTTCATGGATGTTATGATTTCCATTATCGGAGAAAAAAAGATTCATGGGTTTGATGCTGATACTATAATTAAAGCCACAACAATGGCAATGATCGTGGGAGGAACTGATACAACTGGTGTTACTCTTACATGGGCACTAAGTTTGTTATTAAGAAATCCTCGTACACTAAAAAAAGTAAAAGAAGAACTCGATAGTCAAATTGGAAAAGAGAGATGCATAACGGAGTCAGATTTAAACAAATTGGTGTATCTTCAAGCCATAGTGAAAGAGACACTAAGATTATATCCAGCAGGTCCTCTTGGAGGACCACGTGAATTCACAGAGAGTTGCACTTTAGGTGGATTTTATGTTACAAAAGGATCTCGACTAATTACAAATATATGGAAGATTCAAACTGATCCTAGTATTTGGTCAGATCCCTTGGAATTCAAGCCAGAGAGGTTCCTCACAACTCACAGAGACACAGACCTTAAGGGTCAGCATTTCGAGTTTTTGCCATTTGGAAGTGGTAGAAGGATGTGTCCTGGAATGTCGTTTGCACTTCAAATGGTTCACTTTGCTTTGGCCAGGTTCTTGCACTCGTTTGAGATTTTGAAACCATCTTCTGATGAAGCAATTGATATGACTGGTATCCTTGGACTGTCTTATGCCAAAGCTACTCCAATTGAGATTCTCATCAAGCCATGTTTGGCTCAAGCTTGTTATGAAACCATGTAA 1626 0.4311 MDSVLNYLNPTAIIGILSLIIVLLYILLFRPFKPGGNLKEPPMAAGAWPILGHLPLLRGSQPLHTTLGTMADKYGPLFTIKFGATKTIVLSNWEMAKECFTINDMAISSRPKTVAIENLSYNFAVFGLGPYGPYWRELRKIVTLELLSNRRIELLGHVRVSEVQASINELYSLWSRKKNKESYNSDDDGYVSVEMKEWFSQLTFNSVLRMIAGKRYFGGATADAVSTAVGEEKAKKCLKLIEDFMHLLGLFTVGDAIPALRWMDLGGHERAMKRTAKELDSVLNEWLEEHRRSFGEKATSERDFMDVMISIIGEKKIHGFDADTIIKATTMAMIVGGTDTTGVTLTWALSLLLRNPRTLKKVKEELDSQIGKERCITESDLNKLVYLQAIVKETLRLYPAGPLGGPREFTESCTLGGFYVTKGSRLITNIWKIQTDPSIWSDPLEFKPERFLTTHRDTDLKGQHFEFLPFGSGRRMCPGMSFALQMVHFALARFLHSFEILKPSSDEAIDMTGILGLSYAKATPIEILIKPCLAQACYETM* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4597 541 Gene3D Cytochrome P450 35 536 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4597 541 PANTHER CYTOCHROME P450 82A3 1 540 - -
Amo05g4597 541 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Amo05g4597 541 PANTHER CYTOCHROME P450 82C3-RELATED 1 540 - -
Amo05g4597 541 PRINTS P450 superfamily signature 336 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4597 541 PRINTS P450 superfamily signature 389 400 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4597 541 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4597 541 PRINTS P450 superfamily signature 477 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4597 541 Pfam Cytochrome P450 45 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4597 541 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4597 541 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4597 541 PRINTS E-class P450 group I signature 325 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4597 541 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4597 541 PRINTS E-class P450 group I signature 388 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4597 541 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4597 541 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4597 541 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4597 541 SUPERFAMILY Cytochrome P450 47 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4597 Amo-Chr5 118684145 118687234 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4597 11 538 Cytochrome P450 AT4G31940 49.064 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4597 - - aip:107643961 1038.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g4597 05 118684145 118687234 Amo15g1517 15 111390378 111392827 hybridization