Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4587 ATGGATCCAATTCTAACTTATCCAAACACCACCTCAATTACTGGAATAACAATCCTTTCTCTTGTTATTACCATCTTATTCTATTTATTAATGTATCGTCCATTCAAAGCTGGCAATAAACATAGAGAACCTCCAATGGTGGCTGGTGCATGGCCTATACTGGGTCACCTTCCACTCTTCCATGGCTCACGTTCACAGCCACTCCACATTACTTTGGGCGCCATGGCTGACAAATATGGACCCCTTTTCACCGTGAAGCTTGGTTCCAAAAAGATTGTAGTACTAAGCAACTCAGCAATGGCGAAAGAATGCTTCACAAAGAATGATGCAATTGTTGCTTCTCGTCCCAATCTTGTCTCATTCGAAAACCTTGGCTACAATGGAGCCATGATTGGTTTCACGCCGTACGGTCCATATTGGCGTGAACTCCGCAAGTTTTCAAACTTAGAGCTTCTCTCGAATCGCCGCATAGAGCTGCTAAGCCATGTTCGAGTCTCGGAAGTTCGAGCTTCAACAAAAGATCTCTTAAGTCTTTGGTCCACTCAGAAGAATGAATCTGGATACGTGTTGGTGGACGTAAAGCAATGGTTTGCAGAGTTGACATTCAACATGGTTCTTAGAATGGTTGCGGGGAAGACATTCTTTGGAGCTGTAGATTCAGAGAGTGAGGATAAAGCGAGTAAGTGTTTGAAGACTATTAGGGAGATGATGCGTCTTATGGGGATGTTTACTGTGGGAGATGCTATTCCTTCATTAAGGTGGCTTGATTTGGGGGGCCATGAAAAGGCCATGAAAGAAACTGCTAAACAACTCGATGAGATTTTGAGTGGATGGTTGGATGAGCATCGCAAAAACATGGATTTCTTAGATGAAAAGGGTTCAAGTGAAGAGCCACGTGATTTCATTGATGTCATGCTTTCGGTGTTTTCTCATACTCACATTCGTGAGTTTGATGCTGACACCATATATAAAGCCACGATATTGACAATGATAGTTGGGGGAAATGACACCACCACAGTTTCTCTTACATGGGCCATGTGTTTGCTATTGAAAAATCCTCACGTATTGTATCCAGCAGCTCCTCTAGCAGCACCTCATGAATTCACAGAAGATTGCAATTTAGGTGGATATCACATCAAAAAGGGAACTCAGCTAATTACAAATATTTGGAAAATCAATACCGATCCTTATATTTGGTCAGATCACTTGGACTTCAAGCCAGAAAAATTCCTCACAACCCACAAAGATATCGACGTTAAAGGCCATCACTTTGAATTGTTACCGTTTGGAGGTGGTAGACGTATTTGTCCCGGAATTTCATTTGGCCTTAAAATGCTTCACTTTGTTTTGGCGAGCTTTTTGCATTCCTTTGAAATATTGAACCCACCTATTGAATTTGTTGATATGAGTGCAACTCTTGGATTGGTCATTGCTAAAACTACTCCACTTAAGATCATGGTTAAACCACGTTTATCTCCCAACTGTTATCCTTTAGTAGTACAAAAATAA 1509 0.4135 MDPILTYPNTTSITGITILSLVITILFYLLMYRPFKAGNKHREPPMVAGAWPILGHLPLFHGSRSQPLHITLGAMADKYGPLFTVKLGSKKIVVLSNSAMAKECFTKNDAIVASRPNLVSFENLGYNGAMIGFTPYGPYWRELRKFSNLELLSNRRIELLSHVRVSEVRASTKDLLSLWSTQKNESGYVLVDVKQWFAELTFNMVLRMVAGKTFFGAVDSESEDKASKCLKTIREMMRLMGMFTVGDAIPSLRWLDLGGHEKAMKETAKQLDEILSGWLDEHRKNMDFLDEKGSSEEPRDFIDVMLSVFSHTHIREFDADTIYKATILTMIVGGNDTTTVSLTWAMCLLLKNPHVLYPAAPLAAPHEFTEDCNLGGYHIKKGTQLITNIWKINTDPYIWSDHLDFKPEKFLTTHKDIDVKGHHFELLPFGGGRRICPGISFGLKMLHFVLASFLHSFEILNPPIEFVDMSATLGLVIAKTTPLKIMVKPRLSPNCYPLVVQK* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4587 502 PANTHER CYTOCHROME P450 82A2 5 356 - -
Amo05g4587 502 PANTHER CYTOCHROME P450 82A2 356 496 - -
Amo05g4587 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Amo05g4587 502 SUPERFAMILY Cytochrome P450 49 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4587 502 PANTHER CYTOCHROME P450 82C3-RELATED 356 496 - -
Amo05g4587 502 PRINTS P450 superfamily signature 333 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4587 502 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4587 502 Gene3D Cytochrome P450 356 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4587 502 PANTHER CYTOCHROME P450 82C3-RELATED 5 356 - -
Amo05g4587 502 PRINTS E-class P450 group I signature 388 412 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4587 502 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4587 502 PRINTS E-class P450 group I signature 100 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4587 502 PRINTS E-class P450 group I signature 322 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4587 502 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4587 502 PRINTS E-class P450 group I signature 76 95 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4587 502 Pfam Cytochrome P450 356 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4587 502 Pfam Cytochrome P450 49 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo05g4587 502 Gene3D Cytochrome P450 36 355 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4587 Amo-Chr5 118580957 118585324 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4587 45 496 Cytochrome P450 AT4G31940 43.750 1.50e-145 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4587 - - adu:107490967 960.674