Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4586 ATGATCATTCCGGAGAAGAACCGCAAGGAGATCTGCAAATACCTATTCCAAGAGGGAGTATGCTACGCGAAGAAGGACTTCAATCTTGCGAAGCACCCTGAGATTGATGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGCTTCAAGTCGAAGGAGTACGTCAGGGAGACGTTTGCCTGGATGCACTATTACTGGTTCCTCACCAACGATGGCATCGAGCATCTCAGGACATACCTCAACCTTCCTTCTGAGATCGTCCCCGCCACTCTCAAGAAGCAAGCCAAGCCACCTGGCAGGCCTTTTGGCGGCCCACCGGGTGACCGCCCCAGGGGTCCACCTCGCTTTGATGGAGAGCGTAGATTCGGTGACCGTGATGGATACCGCGGAGGCCCACGAGGACCTGGCGGTGATTTTGGAGGAGACAAGGGTGGTGCTCCTGCTGACTACAGACCTTCTTTTGGGGGTGCTGGTGGAAGGCCTGGCTTTGGTCGGGGTGCTGGTGGTTTTGGAGGCAGCGCTCCAACAAGCTCAAACGCTCCTTAA 546 0.5549 MIIPEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEHLRTYLNLPSEIVPATLKKQAKPPGRPFGGPPGDRPRGPPRFDGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGAGGRPGFGRGAGGFGGSAPTSSNAP* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4586 181 MobiDBLite consensus disorder prediction 90 181 - -
Amo05g4586 181 Pfam Plectin/S10 domain 3 94 IPR005326 -
Amo05g4586 181 Gene3D - 1 104 IPR036388 -
Amo05g4586 181 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 181 - -
Amo05g4586 181 MobiDBLite consensus disorder prediction 112 128 - -
Amo05g4586 181 PANTHER 40S RIBOSOMAL PROTEIN S10 1 181 IPR037447 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4586 Amo-Chr5 118569362 118571355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4586 1 154 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 83.226 9.40e-76 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4586 K02947 K09422 bvg:104888371 224.942