Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4549 ATGGATAGAAGGGGTTGTTACAAGGAATTGGTGCCATTTGTGGTGCTTGTGGCGATTGAATGCAGCAACACAGGCTTGTTCACTCTCTTCAAAGCAGCCAGCAATGGAGGCATGAGCAACTATGTCTTTGTTCCATATGCTTATTCTGTTTCAACCATTGTACTCTGTCCTATCACTTTCTTCTATAGAAGATCAAGAGTGGTTCCTCCACTGAGTTTCTCAATCATTTCCAAAATTGCCCTGCTTGGGGTCATAGGATGTTCATCACAGATGCTGGGCTATGCTGGAATTAGTTACAGTAATCCCACACTTTCCTCAGCTATCAGTAATCTCATTCCTGCTTTCACCTTCATACTTGCCATCATTTGCAGGATGGAAAAGATAGATGTAAAAACTAGAACAACCCAAGCTAAAATTGTGGGAAGCATAATATCAATAGGAGGTGCATTTATAGTGACATTCTACAAAGGCCCATCCATCATTATTGCTGATGATTCCCCTTCTCTCCATCTTGTTCAACGATTAAATGGAAACTTTGAATCAGTGGATACAAATTGGGTCATTGGTGGCTTTCTTCTCACAACTGGCAATATCCTACTCACACTATGGTTCATTCTACAGGTGGAAATCTTGAAGGAGTTTCCAGATGAACTATCTATGGTCTGCTTTTACAACTTGTTTGCTGCCATATTTGCATATGCTTTTGGTTTAATAGCAGAGACAAATCCAAGTGCTTGGAAACTAAGACTAGATTTATCATTGGTCTCCATAGTTTGCATTGGAATATTTAATAAGTTCTTGAGCAGTGCAATATATGCATGGGGAATACACTTAAAGGGTCCTGTATATGTAGCAATGTTCAAGCCACTCTCAATTGTTATTGCTGTTGCCATGGGTATCATGTTCCTTGGGGATATTCTACATGTTGGAAGCATAATTGGAGCTACTGTAATATCAATTGGATTTTACACTGTAATGTGGGGCAAAGCAACAGAGGAGAAGGAGGAAGAAGTTGTTGGAAGCCATGAATCACCAACTACTGAGCATGAACATGTTCCTCTCTTGCAAAACTGTAAAACAGTAAATTCTCAAAAGAATGTAGATGTAAATGTATGGTAG 1119 0.395 MDRRGCYKELVPFVVLVAIECSNTGLFTLFKAASNGGMSNYVFVPYAYSVSTIVLCPITFFYRRSRVVPPLSFSIISKIALLGVIGCSSQMLGYAGISYSNPTLSSAISNLIPAFTFILAIICRMEKIDVKTRTTQAKIVGSIISIGGAFIVTFYKGPSIIIADDSPSLHLVQRLNGNFESVDTNWVIGGFLLTTGNILLTLWFILQVEILKEFPDELSMVCFYNLFAAIFAYAFGLIAETNPSAWKLRLDLSLVSIVCIGIFNKFLSSAIYAWGIHLKGPVYVAMFKPLSIVIAVAMGIMFLGDILHVGSIIGATVISIGFYTVMWGKATEEKEEEVVGSHESPTTEHEHVPLLQNCKTVNSQKNVDVNVW* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4549 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 156 - -
Amo05g4549 372 PANTHER WAT1-RELATED PROTEIN 8 356 IPR030184 GO:0016021|GO:0022857
Amo05g4549 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 330 - -
Amo05g4549 372 Pfam EamA-like transporter family 189 326 IPR000620 GO:0016020|GO:0016021
Amo05g4549 372 Pfam EamA-like transporter family 27 153 IPR000620 GO:0016020|GO:0016021
Amo05g4549 372 PANTHER WAT1-RELATED PROTEIN 8 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4549 Amo-Chr5 118057297 118060439 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4549 8 345 Nodulin-like Gene Family AT5G40240 47.337 1.17e-115 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4549 - - gmx:100791805 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g4549 05 118057297 118060439 Amo15g1616 15 113914549 113918649 hybridization