Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4548 ATGGCAAGAAGATGGTCCTTCTACAAGAATCTGCTTCCAATCTTGTTGCTTATTAGTATAGAGTGCAATGATATGGGGTTACTCACTTTGTTCAAAGCAGCCACCAATAAAGGCATGAGCAACCATGTGTTTGTTGCATATGCTTATGCTATTGCTACTATTGTTCTTATTCCTGCACCTTTCATCTCCAAAAGATCAAGAGTGGTTCCTCCACTCAGTTTCTCCATACTTTCCAAAATTGTCCTTCTTGGGATCATAGGAAGTTCATCTCAAATTCTGGGGTATGCTGGAATCAGTTACAGTTCTCCAACACTTGCTTCATCAATTGGCAACTTGGTTCCTGCTTTCACCTTCTTGCTTGCAGTCTTTTTCAGGATGGAAAAGATAGATGTAAAAAGTAGAACTAGTCAAGCTAAGGTAATGGGAAGCATAATATCAATAGCAGGAGCATTTGTGTTGACTTTCTACAAAGGTCCATCTATCAGCAACAATTCTCATACCAAAATTACCTCATTGCCCCTGCTTCAGCAACCAATTAACCTTCCCAGAGCAGTGGACACAAATTGGGTCCTTGCTGGAATTCTTCTAACAGCTGACTATTTACTTTTTTCAATATGGTACATTTTACAGGTGGATGTATTGAAGGATTACCCAGATGAACTAAGTATGCTCTTCTTTTACAACGTGACTTCAACCATCATATCTACAATTGTAGGTTCAATTTTAGAGCCTAATGCAAGTGCTTGGAAGATAAGGCTAGACATTTCATTGGTCTCCATTCTTTGCTCAGGTTTACTTGGAAAGTTCTTGAGCAATGCAATTTATGCTTGGGTGATGCACATAAAAGGTCCAGTTTTTGTAACAGCATTCAAGCCACTATCAATTGTTATTTCTGTTGCCATGGGAGTCATGTTCCTAGGTGACACTCTTTATATTGGAAGTATAATTGGGGCCACAATAATATCAATTGGACTCTACACTGTATTGTGGGGAAAATCAAAAGAAGAGGCAGAGGAAGATGTTATTGGTAGCCTAGAATCACTAACTAGTGAGAATGTTCCATTCTTGCATAGCTACAACACTTCTTACTCTGAAAAGAAAACAGACACAAATTAA 1116 0.3862 MARRWSFYKNLLPILLLISIECNDMGLLTLFKAATNKGMSNHVFVAYAYAIATIVLIPAPFISKRSRVVPPLSFSILSKIVLLGIIGSSSQILGYAGISYSSPTLASSIGNLVPAFTFLLAVFFRMEKIDVKSRTSQAKVMGSIISIAGAFVLTFYKGPSISNNSHTKITSLPLLQQPINLPRAVDTNWVLAGILLTADYLLFSIWYILQVDVLKDYPDELSMLFFYNVTSTIISTIVGSILEPNASAWKIRLDISLVSILCSGLLGKFLSNAIYAWVMHIKGPVFVTAFKPLSIVISVAMGVMFLGDTLYIGSIIGATIISIGLYTVLWGKSKEEAEEDVIGSLESLTSENVPFLHSYNTSYSEKKTDTN* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4548 371 PANTHER WAT1-RELATED PROTEIN 5 358 - -
Amo05g4548 371 PANTHER WAT1-RELATED PROTEIN 5 358 IPR030184 GO:0016021|GO:0022857
Amo05g4548 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 243 334 - -
Amo05g4548 371 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 156 - -
Amo05g4548 371 Pfam EamA-like transporter family 26 154 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4548 Amo-Chr5 118040348 118047143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4548 1 360 Nodulin-like Gene Family AT3G28050 48.925 4.64e-118 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4548 - - gmx:100790743 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g4548 05 118040348 118047143 Amo15g1617 15 114010865 114013806 hybridization