Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4540 ATGGCTGTTAGAATTCTTTCGTCTCTCCGTTCAGTCTCTTCATCTTCTGCTTCACCTTCTACTGGACTATATTGTAGATGGGTTAGAAGTATAAGCAGAATTGGTGCTTCTGCTGCTGCTGAAGCTGAGCCTGTGACTCCACCAGTGCAAGTTGATTATAGTCAGCTTTTAATTGATGGAAAATTTGTGGATGCAGCTTCTGGAAAAACTTTTCCAAGCTTTGATCCAAGAACAGGAGAAGTAATAGCAAATGTTGCCGAAGGTGACAGTGAAGATGTTAACCGTGCGGTCTCTGCTGCACGCAAGGCGTTTGATGAAGGACCATGGCCAAGATGA 336 0.4405 MAVRILSSLRSVSSSSASPSTGLYCRWVRSISRIGASAAAEAEPVTPPVQVDYSQLLIDGKFVDAASGKTFPSFDPRTGEVIANVAEGDSEDVNRAVSAARKAFDEGPWPR* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4540 111 SUPERFAMILY ALDH-like 51 108 IPR016161 GO:0016491
Amo05g4540 111 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 21 111 - -
Amo05g4540 111 MobiDBLite consensus disorder prediction 7 21 - -
Amo05g4540 111 MobiDBLite consensus disorder prediction 1 21 - -
Amo05g4540 111 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 29 111 IPR016162 GO:0016491
Amo05g4540 111 Pfam Aldehyde dehydrogenase family 62 106 IPR015590 GO:0016491
Amo05g4540 111 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 21 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4540 Amo-Chr5 117895580 117896187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4540 1 111 Aldehyde Dehydrogenase Gene Family AT3G48000 60.870 5.00e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4540 K00128 - vvi:100259296 137.502