Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4539 ATGTTGATAGCAAAAGATGAGATCTTTGGTCCAGTACAAACAATCTTGAAATTTAGGGATATAGAGGAAGTGGTACAGAGGGCAAATTCAACTTCTTATGGCCTTGCTGCTGGAGTCTTTACAAAGTCCATAGACACTGCTAACACATTGATGCGCGCGCTGCGAGTTGGGACAGTTTGGATCAACTGTTATGATGTCTTCGATGCGGCAATACCTTTCGGCGGATACAAGATGAGTGGACAAGGGAGAGTGAGGGGAATGTATGGCCTTAGCAGCTACCTTCAAGTTAAAGCTGTTGTCAATCCTTTGAAGAATCCAGCATGGTTGTAG 330 0.4424 MLIAKDEIFGPVQTILKFRDIEEVVQRANSTSYGLAAGVFTKSIDTANTLMRALRVGTVWINCYDVFDAAIPFGGYKMSGQGRVRGMYGLSSYLQVKAVVNPLKNPAWL* 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4539 109 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 109 - -
Amo05g4539 109 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 1 104 IPR016163 GO:0016620
Amo05g4539 109 SUPERFAMILY ALDH-like 1 105 IPR016161 GO:0016491
Amo05g4539 109 Pfam Aldehyde dehydrogenase family 1 99 IPR015590 GO:0016491
Amo05g4539 109 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 1 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4539 Amo-Chr5 117893034 117893480 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4539 1 109 Aldehyde Dehydrogenase Gene Family AT3G48000 71.560 4.08e-55 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4539 K00128 - gmx:100798892 197.593