Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4535 ATGTTCCTTCCAACAAGAAAATCCATAACCATATCCATCATTATCCTCCTCCTCAATCAAACAACAACATTAGTCTCATCAAAATGCACTTGTGATGACAATTCAAATGACAACAATAATGTTTCTGAGGCACTAAAGTACAAACTAATAGCCATGACAACAACACTAGTTGCTAGCATAATTGGTGTGTGTCTTCCAATCATGGCGAAGAACTACAGATACCTTAACCCAGAGAATGATTTCTACTTCTTGGTGAAATCATTTGCTGCTGGTGTGATCCTAGCAACAGGGTTCATCCACATTCTTCATGATGCATTTGAGAATCTAACAAACCCTTGTATTGGTGAAAAGCCTTGGGGGTTGTTTCCGTTTTCTGGGTTTGTGGCAATGCTTGCAGCAATTGGGACACTCATCATGGAAGCTTTGCTTACTGGCTACCATAAAAGGTCTGAATTGATGAAAGCTCAGCCTCTGGAAGATGAGGATGAAGAAGTTCATCATCACCATCATGGTGCTGGTGGTGGTAACGTTCTTAACCCTGCTCTTCCGTCGTCAAACAGATTAGATTCGCCGGAAGATTCGCCCGATCATCTTCGAAATTCTATAGTTTCTCAGATTTTGGAGTTAGCTATTGTTGCGCATTCAATCATTGTTGGAGTGTCTCTTGGGGTGTCCCAAAGTCCTAACACAATCAAGCCTCTGGTAGCTGCATTGAGTTTTCATCAATGCTTTGAAGGCATGGGACTTGGTGCCTGCATTTCCCAGGCACAATTTAAAAATTATACAGTTGTAATTATGGTACTATTCTTTTGCTTCACAATCCCAACCGGAATTGGGGTTGGTATTGGTATATCAAAAATCTACAATGAAGGCAGTCCAAAGGCTTTAATAGTTGAAGGGATTCTGCTATCAGCATCCGCAGGGATTCTAATTTACATGGCTCTTGTTGATCTTCTTGCTTCCGACTTTATGAACCCTAAAATGCTAAGGAGTCTTAGGCTCCAACTTGCTGCAATTCTTGCACTTCTTGTGGGAGTCATTTGTATGTCGCTCTTGGGATGTACAAATGAATGGGCTGTGTGGAAATTGAACACAGGTATGATGCTTTTAGCTTCTCGCAGACCACGAGGATCTGACATTATCATCCCACACTATGTGGGTTTCTGA 1167 0.4156 MFLPTRKSITISIIILLLNQTTTLVSSKCTCDDNSNDNNNVSEALKYKLIAMTTTLVASIIGVCLPIMAKNYRYLNPENDFYFLVKSFAAGVILATGFIHILHDAFENLTNPCIGEKPWGLFPFSGFVAMLAAIGTLIMEALLTGYHKRSELMKAQPLEDEDEEVHHHHHGAGGGNVLNPALPSSNRLDSPEDSPDHLRNSIVSQILELAIVAHSIIVGVSLGVSQSPNTIKPLVAALSFHQCFEGMGLGACISQAQFKNYTVVIMVLFFCFTIPTGIGVGIGISKIYNEGSPKALIVEGILLSASAGILIYMALVDLLASDFMNPKMLRSLRLQLAAILALLVGVICMSLLGCTNEWAVWKLNTGMMLLASRRPRGSDIIIPHYVGF* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4535 388 MobiDBLite consensus disorder prediction 157 177 - -
Amo05g4535 388 PANTHER ZINC TRANSPORTER 5-LIKE 20 353 - -
Amo05g4535 388 TIGRFAM zip: ZIP zinc/iron transport family 32 353 IPR004698 GO:0005385|GO:0016021|GO:0071577
Amo05g4535 388 MobiDBLite consensus disorder prediction 157 171 - -
Amo05g4535 388 PANTHER ZINC/IRON TRANSPORTER 20 353 - -
Amo05g4535 388 Pfam ZIP Zinc transporter 46 352 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4535 Amo-Chr5 117833161 117837138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4535 14 361 Inorganic Solute Cotransporters AT3G12750 47.075 7.62e-103 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4535 K14709 - qsu:111993283 367.081