Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4529 ATGATCATGGAACTCACAGATTCCGGTTCCGCCGGCGACCGCACCACCGCTCCGCAGCCTCAAGACTCTCGCTCCTCCGGCCTCGAAATCGACCTCAACGAGATCCCTTACGCCGCAGCTTCACCTTCTTCCAACCACGCCGAAACCCTACCGCCGCCACCGGACTCCGCCGTCGACATCGTCCGCGCTTATCACGAGAACCCCGCGCCGCTACCAGGAGCTCCCGCCTCGCTACCCCGCGGCTCTGCTCCCTGTGCCACATGCTCTAAGCCGCCTGGTGCCGCCGGTGTTGTCGTCTGCGACGGCTGTGAGCGCGTGTTCCACATCGCATGTGCTGGGTTTCGCGGGACCCGCCAGGCGGCGATCCTTGATGAGTGGCTCTGCAGCGAGTGTGCCGTCGGCGGAGTGAGGAGCAAGAGGTGGCCGCTCGGCGTCAAGTCCAAGCAGCTCCTGGATATCAATGCCTCGCCGCCCAGTGATGCTGACGGAGAAGGTGCTGGCGAGGAGTTACAGGATTCGAGAAAGCACACTCCGGGTGATAATTCTTTTGGTGCCAATCCATTTGGTGCCCCAGTGACATGTTCAAACTACTACAATGGGAACACTTTTGGCTTCCAAAAGGCATCGGGAGTTGTAACACATGCTGTTAGAGTGGGTTTTGAGGATATACTGAATCATACCCAATCAATGACTAGATGCTTTGAGGAGGCTCTTAGAGACTTCATATCTGAAAGGCGTGGTGTGCTAGAGGAAGGTTGGCGAGTGGAATTTAGGCAATCCATGAACAGTTCTGAACTGTATGCAGTTTACTGTGCTCCTGATGGGAAAATTTTTGATTCTGTGTATGAAGTAGCTTGTTATTTGGGGCTAACATCTGGCTACAACTCTATGGAATCCGAAGTTAGAAATGATAGGTCTCTTGCTTCATTAGGTGGAACTCATCTATCCAGAAAAAGAAAGTCAACAAGGAATCTATCCAATGGTTTTGTCGAAAAATTAGGAACCTTGATCAATAGTTACTGTAGGGATTCTCCATCTGATGCTTTAACTGTGGAATGTACTGGTGATCATGGGCATGTCCACAAAGCCTCAGAAATTGCAAGAAAAGAGGATTGTCATTCAGGTTGTCTGCAATCTTCTGATAGACTTCCTCTACGGTTCGGCGATTTTTTTGTTCTTTCTTTGGGAAAAGTTGATGATAGACCTACATATTATGATGTTCACCTTATCTGTCCCATAGGTTATAAATCTTGTTGGCATGATAAGATTACTGGTTCTCTTTTTACATGTGAAGTTTTAGAGGGTGGTGATTCTGGACCTATATTTAGGATAAAAAGGTGCTCTTGTTCTGAGTTTCCTGTTCCAGTTGGGTCAACTGTCCTATCAATGTCAAATCTCTGTCAATTTTTGAATAAAAATAATGGTGAGAGAAAGACTGATGATAGCATGGATTACGATGTTCATGAAAGTATCCAGATGATTCTTTCAGATCCTTGTGTGCCAACGGAAAATGATGTCATTAATTGTATTGCAAGTTTCTCAAATGAAACATGTGCTGGAGATTCAATATCCCAAGACTCAGGATTGATTGATGGAATTGGTGAAATTTTGGTGGAAGAGAGGTCATCATCTGCGGCTTGGAGAGTTATTTCTCAGAAGGTAGTAAATGCGTGCAATGATATCTGCAAGCAGAAAGGAAGCCTTAAGTTCTATTGTAAACATATTGAAGATGAACCGTGCTTACACAAATGGGACACAAATAGTAAAAAAAGTGATGCACACTTTTCTTTGTTGGATAAATTTTGTGGTTCACTATGTTCAGTTAGCGTTCCGGATGTAACTTATGCAGACAATGATCTAAAAGGTCTCTCTGAGGTTTTAGGAAAATGGCTGGAGCAAGATAGATTTGGATTAGATGTAGAATTTGTGCAAGAAGTATTGGAACAGCTTCCGGGTGTTAAAGAGTCTCTGAAGTATGAACTTCTAAGCAGTCGGAGTAATAGCTCATCATTGCCAACAGTTGAGAATGGTTTCCTAGTGGTTGAATGGAGAGGTGGATCACAATATCAGGATGAAAATGAAGCAGTTCAAGGTTCGTACAAGAAGCCCAGAAAAGTGGGACTGACTGAAAAAAGCGTCAGGGAAGATCGTTGTCCACCTCCTGGGAAGTCGTTATGTTCTAGAGTTCCTAGTGAACTTATTGGTGACATTCTTCAGGTTTGGGAGCTTTTAGACCGATTTGATGAAATTCTGGACTTGAAAGAGCCGTTGTCGCTAGATGAGCTAGAGAAGGAACTTATCAACCCATGGTTTGATGAATTGGATTTGAATGAGAAATCTGAGAGGGACATTGATGCCGGTCAGGTTTTGAGTTCGCAAGGCACTGATGATGATTGTAGACCAACTCTGTCCTCAAGTTGTGACGCTGGCCCATCAAGATACAAAGAAAGTTCTCATGCCTTTATTCAAATGGAAACAGAAGCAATGAAAGAGGCAGCCCAAGTTAAGTTTGCATCTTTCACTTACGCTCGATGCTTTGGTGTAGCCTTGACAAAGGCCCATAATTCATTGCTAAGAGTGCTAGTTGGTGAACTGCAATCAAAGGTGGCTGCCCTGGTGGATCCAAATTTCGAACCTGGAGAGCCTAAAACAAGACGTGGAAGAAGGAAAGATATAGACAGTGCTATTCCTGCCAAACGTACGAAGCTCAATATGCTTCCTATTAATGAATTAACATGGCCAGAATTAGCTCGTCGATATATCTTGGCTGTCTTATCAATGGATGGGAACCTTGACTCAGCAGAAATTACTGCTCGTGAAAGTGGTAAAGTGTTTCGTTGCTTACGAGGTGATGGTGGCTTGCTTTGTGGTTCCCTTTCTGGTGTGGCTGGGATGGAGGCAGATGCACTGAAAATATTTGGTTCTTTGAGCAAAGAGAATGATGTGCTAACCATGGAAGATGATGAGTCCGATGCAAATGATCCTTCTGAAAAAAAATTGGGGAGTGATGGTATTCTTCCCGAATGGGCACAGAAGCTAGAACCTGTCAGAAAGTTGCCAACAAATGTCGGAACCCGAATCAGAAAGTGCGTCTATGATGCTCTGGAAATGAATCCTCCGGAGTGGGCGAGAGAAATACTTGAGCGTTCCATTAGCAAGGAAGTGTACAAGGGAAATGCATCTGGACCAACGAAGAAAGCAGTTCTTCAACTGTTAAGTGATCTGTTTCGTGGAGGAGTGCAGCAGAACCCTAATGAAGGAAGGAAGAAAAAGATTGTTTTGTCAATTTCTGACATTATCATGAAACAATGCCGCATTGTATTACGCCGTGCTGCGGCTGCTGATGATTCAAAGGTTTTCTGCAATTTGCTGGGTAGAAAGTTAATCAATTCTTCTGATAATGATGATGAGGGGCTTCTTGGATCTCCAGCTATGGTGTCCCGTCCTCTTGACTTCCGCACTATCGACCTAAGGTTGGCTGCTGGAGCTTATGGGGGATCTCATGAAGCTTTTCTTGAGGATGTTCATGAGGTTGTCACCTATTTTGAAAAATTTGTGGAGTATTCGAAGGTGGGATGCTTGAATGCAGAAATGAGAAAAGAAGTTGAAGATTTTATTGCATCAACAAGTGAGATTCCTAAAGCTCCTTGGGATGAGGGAGTCTGTAAAGTATGTGGGATTGATAGGGATGATGATAGTGTCTTACTATGTGATACTTGTGATGCTGAGTATCATACATATTGTCTGAATCCTCCACTTGCAAGGATCCCTGAAGGAAACTGGTACTGCCCTTCTTGTGTCAATGGTAAGCATGCCACTCAAGATGTTACAAATCATGCACAGATTATTGGCAAGCGTCAAAGTAAGAAGTTCCAGGGAGAAGTTCATTCTCTTTACTTGGATGTGCTAACTCATTTATCTGCTGTAATGGAAGAAAAAGAATACTGGGAGTACAGTGTGGGCGAGAGAACTTCCCTTCTTAAGTTTTTGTGCGATGAGTTGCTTAACTCTTCCCTGATACGGCAGCACCTTGAGCAATGTGCAGATTTATCTGCTGAGTTACATCAGAAATTGCGTTCTCTCTCCACAGAATGGAAAAACCTGAAAACTAAAGAAGATATCTTATCCTCAAAGGCTGCAAAAGTTGTTACATGCATGCCAAATACCACTGGAGAAGTTGGTTTCAAGGAAGGGGTCACAGCTGCACTCTCAAGTACGGGTAAATGTCTGGTGCAGCCACATAATGTAATTGACAATCCTAATAATTTTGGGGTATCTGTTGATAGTTTGCAGTCAGAAGAGGTTACTAACGAGAAGCATAGGCTCAATGGTGTTGACAAAAGTGTATCTGTGATAAATTCAGATTCTGAAAACAAACACTTGAACTCCATAGATGTAGAAGGACAACTTAGGAATGTCTCTGCGGCTGTGGCATCCCAGTGTATGGATAAATCCACAAAATCTTTTCCATCACCAAGTCATATGCCTCATGAACAAAATGGTACTAGTGGAGCAGCTCATATCCAGGGTAATCACCAGAAATGTGACGTGAATGACATATCTACTGTTGATGAGTCAGAACCGTATCGCCTTGAGATCAATGCCATCAAGAGTGATATTTCACGATTAGAAGACTCCATAGCTGATGTCGGATCAAAGCTTCTGAAACTTTCCATTCGTCGGGAATTTTTGGGAATTGACTCCATTGGTCGCCTGTATTATGCGTCAGCTGTAGGCAGAGGTCGTTTAGTCGTTGATGCAAGTGCTGCAGTTCTGTATGGAAGACAAATGGCAGTTGGCAGAGATTCTGTTGACAAGTTTTCTTCCCTGCAGCATAATGTATTATCCGACAAGGATAACTATAAGATCATAGGGTTGCAGAAGGACTCCTCTTGTTTAATGTCTCCACCAAGTGATGGTTCAGGCATTAGTTCTTCATGGGTTGCTTATGAAACTGATGCAGAAATAGAAGAGCTTTTAAGTTGGCTGAAGGACAATGACCCTAAAGAAAAAGAACTGAAAGATTCTATTATGATGTGGCCAAAATCAAGAGCTCAAGAGTTTCATAATTCACCGAATGAAGGTCAGGTTGAGGAACAAGGGAATTTTCCTATACCAAGAAATAAGGAGAAAACAGCATCCAATTCTCTGGTTACAAAGGCGACATCTTTGCTGGAAAAGAATTATGGTCCATTCTTTGAGTGGGATGGCACTGAAGTGTCGAAGAAGCGAAGTAAAAATGCCAGAGTAAATAATGATGAAAAGTTGTATAGGTGTGAATGCCTAGAACCAATATGGCCATCTAGGAAGCACTGCATGTCTTGCCACAAAACTGTTTCAAGTGATGTTGAGCTGGTTGAACACATTGATGGGAAATGCAATGCAGGTCTTCCAGCCTTGGAGAAGAATAGGGATGATAATTTATCTTCTAAAGGAAGAGGGAACACAAAATGTGATTCCTCTCGGGAAATATTCAGAGGTGATGCAGATACAGCTGGAACTGCGGCTGCAACCAATGTTTCTTCTAAGCTTAGCTCAAGATTGATTAAATTTTCAAATGAAGAATCCTCTTGCCCATTTAACTTCGAAGATATATGTTCTAAGTTTGTGACAAATGATTCATGCAAGGAAGTTGTCAGAGAAATAGGTCTTATTGGTTCAAATGGGATTCCATCCTTTCTTCCTTCCATATCTCCCTTTGTTAGTGATTCTACACTCATGCTATTCTCAGCTCAAAACAATGATCGTACTGGTGGTGGAGAATCACTAACATCAGAATGTCAGGTTTCTCTGGGAAGCACTGATGGAGCTGGCAAATGCCATGATAAAAAGTCTGGAATGTCTTTGGCTTCAAATGAAATTAGTAAAGCAGGGATTTCCAATAAAATATCTTTGGAACAAAAAGATGGAAATCTCTCTGAAGGAAATCCTGCTTTGGATATAGGGGTAGATAGCTGCTGTGTGGTCCCATTGTCTTCTTTGAGACCATTAGTTGGCAGATCTTCACATATTTTGAGGCAACTGAAGATCAGTTTACTGGATATGGATGCTGCTCTCCCAAAGGTTGCTTTGAGACCATCAAAGGCACAGTCAGACAGAAGGCAGGCATGGCGGGCATTTGTAAAATCTGCAGAGACAATATATCAGATGGTTCAGGCGACAATTTCACTTGAGGATATGATTAAGACAGAGTACTTAAGAAATGACTGGTGGTATTGGTCATCATTCTCTGCTGCTGTCAAATCATCTACTTTGCCTTCCCTTGCCCTTCGGATATATTCTCTTGATTCAGCTATTATATATGAGAAAATGCCCAATTCAAGTGGTGACAGCTCGGAACCTTCTGCAACGGCAGAACAGAAGCCACCGGCCAATGCTGATGCAGATAAACTGAAAGCAAGCCGGAAGTCAAGTCGGAAAAGGAAGGAACCGGATGGTTGA 6441 0.4318 MIMELTDSGSAGDRTTAPQPQDSRSSGLEIDLNEIPYAAASPSSNHAETLPPPPDSAVDIVRAYHENPAPLPGAPASLPRGSAPCATCSKPPGAAGVVVCDGCERVFHIACAGFRGTRQAAILDEWLCSECAVGGVRSKRWPLGVKSKQLLDINASPPSDADGEGAGEELQDSRKHTPGDNSFGANPFGAPVTCSNYYNGNTFGFQKASGVVTHAVRVGFEDILNHTQSMTRCFEEALRDFISERRGVLEEGWRVEFRQSMNSSELYAVYCAPDGKIFDSVYEVACYLGLTSGYNSMESEVRNDRSLASLGGTHLSRKRKSTRNLSNGFVEKLGTLINSYCRDSPSDALTVECTGDHGHVHKASEIARKEDCHSGCLQSSDRLPLRFGDFFVLSLGKVDDRPTYYDVHLICPIGYKSCWHDKITGSLFTCEVLEGGDSGPIFRIKRCSCSEFPVPVGSTVLSMSNLCQFLNKNNGERKTDDSMDYDVHESIQMILSDPCVPTENDVINCIASFSNETCAGDSISQDSGLIDGIGEILVEERSSSAAWRVISQKVVNACNDICKQKGSLKFYCKHIEDEPCLHKWDTNSKKSDAHFSLLDKFCGSLCSVSVPDVTYADNDLKGLSEVLGKWLEQDRFGLDVEFVQEVLEQLPGVKESLKYELLSSRSNSSSLPTVENGFLVVEWRGGSQYQDENEAVQGSYKKPRKVGLTEKSVREDRCPPPGKSLCSRVPSELIGDILQVWELLDRFDEILDLKEPLSLDELEKELINPWFDELDLNEKSERDIDAGQVLSSQGTDDDCRPTLSSSCDAGPSRYKESSHAFIQMETEAMKEAAQVKFASFTYARCFGVALTKAHNSLLRVLVGELQSKVAALVDPNFEPGEPKTRRGRRKDIDSAIPAKRTKLNMLPINELTWPELARRYILAVLSMDGNLDSAEITARESGKVFRCLRGDGGLLCGSLSGVAGMEADALKIFGSLSKENDVLTMEDDESDANDPSEKKLGSDGILPEWAQKLEPVRKLPTNVGTRIRKCVYDALEMNPPEWAREILERSISKEVYKGNASGPTKKAVLQLLSDLFRGGVQQNPNEGRKKKIVLSISDIIMKQCRIVLRRAAAADDSKVFCNLLGRKLINSSDNDDEGLLGSPAMVSRPLDFRTIDLRLAAGAYGGSHEAFLEDVHEVVTYFEKFVEYSKVGCLNAEMRKEVEDFIASTSEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYCPSCVNGKHATQDVTNHAQIIGKRQSKKFQGEVHSLYLDVLTHLSAVMEEKEYWEYSVGERTSLLKFLCDELLNSSLIRQHLEQCADLSAELHQKLRSLSTEWKNLKTKEDILSSKAAKVVTCMPNTTGEVGFKEGVTAALSSTGKCLVQPHNVIDNPNNFGVSVDSLQSEEVTNEKHRLNGVDKSVSVINSDSENKHLNSIDVEGQLRNVSAAVASQCMDKSTKSFPSPSHMPHEQNGTSGAAHIQGNHQKCDVNDISTVDESEPYRLEINAIKSDISRLEDSIADVGSKLLKLSIRREFLGIDSIGRLYYASAVGRGRLVVDASAAVLYGRQMAVGRDSVDKFSSLQHNVLSDKDNYKIIGLQKDSSCLMSPPSDGSGISSSWVAYETDAEIEELLSWLKDNDPKEKELKDSIMMWPKSRAQEFHNSPNEGQVEEQGNFPIPRNKEKTASNSLVTKATSLLEKNYGPFFEWDGTEVSKKRSKNARVNNDEKLYRCECLEPIWPSRKHCMSCHKTVSSDVELVEHIDGKCNAGLPALEKNRDDNLSSKGRGNTKCDSSREIFRGDADTAGTAAATNVSSKLSSRLIKFSNEESSCPFNFEDICSKFVTNDSCKEVVREIGLIGSNGIPSFLPSISPFVSDSTLMLFSAQNNDRTGGGESLTSECQVSLGSTDGAGKCHDKKSGMSLASNEISKAGISNKISLEQKDGNLSEGNPALDIGVDSCCVVPLSSLRPLVGRSSHILRQLKISLLDMDAALPKVALRPSKAQSDRRQAWRAFVKSAETIYQMVQATISLEDMIKTEYLRNDWWYWSSFSAAVKSSTLPSLALRIYSLDSAIIYEKMPNSSGDSSEPSATAEQKPPANADADKLKASRKSSRKRKEPDG* 2147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4529 2146 Gene3D - 383 492 - -
Amo05g4529 2146 SUPERFAMILY FYVE/PHD zinc finger 1208 1271 IPR011011 -
Amo05g4529 2146 ProSitePatterns Zinc finger PHD-type signature. 85 131 IPR019786 -
Amo05g4529 2146 PANTHER OS02G0192300 PROTEIN 24 2146 - -
Amo05g4529 2146 MobiDBLite consensus disorder prediction 2125 2146 - -
Amo05g4529 2146 ProSiteProfiles FYR domain FYRN motif profile. 382 435 IPR003888 GO:0005634
Amo05g4529 2146 MobiDBLite consensus disorder prediction 2104 2119 - -
Amo05g4529 2146 SMART PHD_3 84 132 IPR001965 -
Amo05g4529 2146 SMART PHD_3 1221 1267 IPR001965 -
Amo05g4529 2146 MobiDBLite consensus disorder prediction 1484 1509 - -
Amo05g4529 2146 Gene3D - 1097 1212 IPR036427 GO:0005515
Amo05g4529 2146 SUPERFAMILY DNA-binding domain 241 293 IPR016177 GO:0003677
Amo05g4529 2146 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 24 2146 - -
Amo05g4529 2146 MobiDBLite consensus disorder prediction 1 35 - -
Amo05g4529 2146 Pfam Methyl-CpG binding domain 240 293 IPR001739 GO:0003677
Amo05g4529 2146 MobiDBLite consensus disorder prediction 9 28 - -
Amo05g4529 2146 CDD PHD_TCF19_like 84 131 - -
Amo05g4529 2146 ProSiteProfiles Zinc finger PHD-type profile. 82 134 IPR019787 -
Amo05g4529 2146 ProSiteProfiles Zinc finger PHD-type profile. 1219 1269 IPR019787 -
Amo05g4529 2146 MobiDBLite consensus disorder prediction 790 811 - -
Amo05g4529 2146 ProSitePatterns Zinc finger PHD-type signature. 1222 1266 IPR019786 -
Amo05g4529 2146 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1305 1345 IPR028942 -
Amo05g4529 2146 Pfam PHD-finger 1221 1268 IPR019787 -
Amo05g4529 2146 Pfam PHD-finger 85 132 IPR019787 -
Amo05g4529 2146 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 138 IPR013083 -
Amo05g4529 2146 CDD PHD1_Lid2p_like 1221 1266 - -
Amo05g4529 2146 SUPERFAMILY FYVE/PHD zinc finger 51 132 IPR011011 -
Amo05g4529 2146 MobiDBLite consensus disorder prediction 2104 2146 - -
Amo05g4529 2146 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 239 306 IPR001739 GO:0003677
Amo05g4529 2146 MobiDBLite consensus disorder prediction 152 182 - -
Amo05g4529 2146 MobiDBLite consensus disorder prediction 1688 1709 - -
Amo05g4529 2146 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1221 1268 IPR013083 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4529 3 2146 C2H2 Transcription Factor Family AT3G01460 44.591 0.0 1654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Amo05g4529 MBD 2.2e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4529 K22768 - gmx:100820223 2943.68