Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4515 ATGAAGAAGAATGAGAGTGGTGGTTATGTAAGAGCGGATCAGATAGATCTGAAGAGCTTGGATGAGCAACTACAAAGGCACCTGAGCAGAGCATGGACGATGGAAAAGAACAAAGAGAAGCAGCAGCAAGAAGATGATGCTGCCATGGCTGCTGCTGCTGCTGCTGCTGCTGCTGAAGGAGCAAGGTCATCATCAAGAACAAGGCAAGAATGGGAGATTGACCCTTCCAAGCTCCTAATCAAGTCTGTCATTGCTCGTGGAACTTTTGGCACTGTTCATCGTGGTGTTTATGATGGCCAAGATGTTGCAGTTAAGCTTCTTGATTGGGGGGAAGAGGGCCATCGTTCCGAAGCGGAAATAGCTTCTCTGAGGGCAGCTTTTACACAAGAAGTTGCTGTTTGGCATAAGCTTGACCATCCTAATGTGACCAAGTTCATTGGGGCGACAATGGGAACATCGGATCTACAGATACAAACAGAGAATGGTCACATAGGCATGCCGAGCAACCTCTGTTGTGTTGTGGTTGAGTATTGTCCCGGAGGTGCGCTGAAGTCTTATCTCATTAAAAATCGGCGAAGGAAGTTGGCTTTTAAAGTGGTTGTCCAACTGGCACTTGACCTTGCAAGAGGGTTGAGTTATCTCCACATGAAGAAGATTGTTCACCGAGATGTTAAAACGGAAAATATGCTTCTGGACAAGACGCGAACCTTGAAGATAGCTGATTTTGGTGTAGCTCGCATCGAGGCTTCCAATCCTCATGACATGACTGGTGAAACCGGAACTCTTGGTTATATGGCTCCRGAGGTTCTAAATGGTAATCCATACAATAGAAAGTGCGACGTGTACAGTTTCGGTATATGCTTATGGGAGATCTACTGCTGTGACATGCCATATCCTGACCTTAGTTTCTCGGAAGTAACATCGGCCGTCGTACGACAGAACCTGAGGCCGGAGATTCCGCGTTGTTGTCCAAGCTCTCTGGCAAATGTGATGAAGAGATGCTGGGATGCCAATCCTGATAAGCGGCCGGAGATGGACGAAGTGGTGTCGATGCTGGAAGCTATCGACACCTCGAAAGGTGGAGGTATGATCCCTCTTGATCAACCTCAGGGTTGTTTATGTTTCCGGAGGTATCGAGGACCTTGA 1146 0.4756 MKKNESGGYVRADQIDLKSLDEQLQRHLSRAWTMEKNKEKQQQEDDAAMAAAAAAAAAEGARSSSRTRQEWEIDPSKLLIKSVIARGTFGTVHRGVYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVAVWHKLDHPNVTKFIGATMGTSDLQIQTENGHIGMPSNLCCVVVEYCPGGALKSYLIKNRRRKLAFKVVVQLALDLARGLSYLHMKKIVHRDVKTENMLLDKTRTLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMLEAIDTSKGGGMIPLDQPQGCLCFRRYRGP* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4515 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Amo05g4515 381 PRINTS Tyrosine kinase catalytic domain signature 175 188 IPR001245 GO:0004672|GO:0006468
Amo05g4515 381 PRINTS Tyrosine kinase catalytic domain signature 213 231 IPR001245 GO:0004672|GO:0006468
Amo05g4515 381 PRINTS Tyrosine kinase catalytic domain signature 279 301 IPR001245 GO:0004672|GO:0006468
Amo05g4515 381 PRINTS Tyrosine kinase catalytic domain signature 323 345 IPR001245 GO:0004672|GO:0006468
Amo05g4515 381 ProSiteProfiles Protein kinase domain profile. 78 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4515 381 PANTHER DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED 1 375 - -
Amo05g4515 381 MobiDBLite consensus disorder prediction 31 69 - -
Amo05g4515 381 SUPERFAMILY Protein kinase-like (PK-like) 65 352 IPR011009 -
Amo05g4515 381 Gene3D Phosphorylase Kinase; domain 1 66 161 - -
Amo05g4515 381 MobiDBLite consensus disorder prediction 31 45 - -
Amo05g4515 381 CDD STKc_MAP3K-like 84 352 - -
Amo05g4515 381 Gene3D Transferase(Phosphotransferase) domain 1 178 363 - -
Amo05g4515 381 SMART serkin_6 78 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4515 381 Pfam Protein tyrosine and serine/threonine kinase 80 352 IPR001245 GO:0004672|GO:0006468
Amo05g4515 381 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4515 Amo-Chr5 117322365 117327213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4515 11 381 MAP Kinase Kinase Kinase AT3G22750 66.933 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Amo05g4515 PK_Tyr_Ser-Thr 2.1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4515 - - gmx:100806635 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g4515 05 117322365 117327213 Amo15g1653 15 115207276 115212126 hybridization