Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4483 ATGGCTTCATCAGATGATTCCACCATTCCAAGTCACACAAAAGCATGGTTCTATTCAGAGCATGGGAATCCAGGTGATGTTCTAAAGATACATCCAAATTGGCCAATACCAGAACTCAAAGAGGACCAAGTGCTCATCAAAGTTGTGGCTGCATCACTTAATCCAGTTGATAATAAAAGAATCACTGACTTCTACAAGGACATTTACACTCCTGATCCTCATCTCCCTATTGTTCCAGGGCTTGATGTTGCAGGTATAGTGGTGAAAGTGGGTGTTCAAGTCAAGAAATTTAAAGTTGGTGATGAAGTTTACGGCGACATTAACGAGGATGGCATACAAAACCTTAAGATTCTTGGAACATTGTCAGAGTATACTATTGCTGAAGAGAGGCTTTTGGCTCACAAGCCTCCAAATCTCAGCTTTGTTGAAGCTGCTAGCTTTCCTGCGGCAGTTGAGACTGCTTATGAAGGACTTGAGAGAGCTGACTTTTCTGCTGGCAAATCTATTCTTGTTCTTGGAGGTGCTGGCGGTGTTGGAACCCAAGTTATTCAGCTTGCGAAGCATGTGTGGGGCGCATCAAGGATAGCAGCAACATCAAGCACTGGAAAACTTGAATTCTTAAGAAAACTGGGAGTTGACTTTCCTATTGATTACACAAAGGAGAACTTTGAGGAGCTGTCAGAAAAGTTTGATCTAGTCTACGATACAGTTGGGCAAACTGAAAGAGCCTTGAAAGGTGTAAAAGAAGGTGGGAAAGTAGTGACAATAGTACCTCCTGGAGTTCCACCAGCTATCTTTTTCGTTCTCACTTCCAAAGGATCTATCTTAGACAAATTAAGGCCTTTCTTTGAGAGCGGCAAGGTCAAGCCAGTTCTGGATCCTCTCACTCCAGTGCCATTTTCTCAAGTCATTCATGCTCTTTCTTACATTCAAACTGCAAAAGCCACAGGAAAGGTGGTCGTTTATCCCATCCCATGA 978 0.4294 MASSDDSTIPSHTKAWFYSEHGNPGDVLKIHPNWPIPELKEDQVLIKVVAASLNPVDNKRITDFYKDIYTPDPHLPIVPGLDVAGIVVKVGVQVKKFKVGDEVYGDINEDGIQNLKILGTLSEYTIAEERLLAHKPPNLSFVEAASFPAAVETAYEGLERADFSAGKSILVLGGAGGVGTQVIQLAKHVWGASRIAATSSTGKLEFLRKLGVDFPIDYTKENFEELSEKFDLVYDTVGQTERALKGVKEGGKVVTIVPPGVPPAIFFVLTSKGSILDKLRPFFESGKVKPVLDPLTPVPFSQVIHALSYIQTAKATGKVVVYPIP* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4483 325 Gene3D - 20 321 - -
Amo05g4483 325 SMART PKS_ER_names_mod 25 321 IPR020843 GO:0016491
Amo05g4483 325 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 166 187 IPR002364 GO:0008270|GO:0016491
Amo05g4483 325 Pfam Zinc-binding dehydrogenase 210 321 - -
Amo05g4483 325 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 1 325 IPR044626 GO:0016628
Amo05g4483 325 SUPERFAMILY GroES-like 9 171 IPR011032 -
Amo05g4483 325 PANTHER CYTOSOLIC ALKENAL/ONE OXIDOREDUCTASE 1 325 - -
Amo05g4483 325 CDD MDR_like_2 14 321 - -
Amo05g4483 325 Pfam Alcohol dehydrogenase GroES-like domain 42 106 IPR013154 -
Amo05g4483 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 139 291 IPR036291 -
Amo05g4483 325 Gene3D - 158 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4483 Amo-Chr5 116580166 116583442 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4483 76 262 Monolignol Biosynthesis Gene Families AT4G37980 25.806 3.88e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4483 K18980 - gmx:100788619 480.33