Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4468 ATGGCTAACTTGGAAATAGAAGAGGAGCCAATGCTATCATCAAATGCACAATCATCCCATGAACTCAAGTATTCTAGTTTCCGGAGGATCCTATCAAGGAGACGAAGCGCATCCATGTACATTCCCATGGTGTCTATGGAGCCATATTACAACAGAGAACCAAGTCTTGGAGAGCATAGTCGTCGTCAACTTAACAGCGTTAGAACCTTCCCGCCCAAGATTGATGAACTATATGCCACCCTTGGAACCCAAAATATTTTCAAACAGAGTGGAGTTACTGTGACTGAAAACAGTGAAAACAACTGGGACGACAACTATGATTGGGAACACACACCACCCGCAGTGAGCGTTGGGCAACAGGGATTGATTTGTAATAATTATTTTTGTATTAGGGTCGGTACTCATGATAATGCTCACCAAGGAATTCCAAGAACTCCCAGTAGATTTGATCAAGAGTACCACGATGACATTCATGGTGATGAAGAGGGTTTTGTCAAAAAAGTGTTATCATTCATCTCTTCATGTATTCCTAAAGTTATAAGCCCACACTCAAAACGCGTCAAGCAATGGAACAAGATTATAGCTATCTTTTGCTTGGTGGCAATATTTCTCGATCCATTATTTTTCTTCATACCGTATGTACAAAAGGATTTCAATTGCATTGTTATCAACTGGACAAGGACAATACCACTTGTTGTACTTAGAAGCTTGAATGATTTAGTGTATTTCTTGAACATACTTCTTCAGTTTAGGTTGGCTTATGTTTCTGCTAGTACTGGATCAAGGGTGATTGATATAGTTGACCATCCAAAAGAGATTGCTATGCATTATTTGCATAGCTATTTTCTTCTTGATTTATTTGTAGTGATTCCGTTGCCTCAGATAATAATATTGTTTGTGCTACCAAAGTACTTGGGTTCATCAGGAGCAAATCATTCAAAGAATCTTATATCTGCAGTGATCCTTGTGCAATACATTCCCAGATTATTCAGGTTCTTGCCATTGCTAATTGGCCAATCTCCAGCAGGAATCATATTTGAGTCAGCCTGGGCAAGTTGCACTCTCAATCTTCTCATTTTTATGCTCTCTGGCCATATTGTTGGCTCTTGTTGGTATCTCTTTGGACTTCAGAGAGTTAATCAATGTTTGCTAGACGCTTGCCATAATGCTAACATCATTGGTTGCATGAAATATGTGGATTGTGGAAAAGGACATTTCTCTCACCAGACACAAGATTTGTGGACAAACAATGTAAATGCCACATCTTGTTTGAATTCGTTGTCTGGTTCTTTTGATTATGGGATCTATGCCGATGTTGTTCGACTTACTACAGGAAGCAACTTGATCAAAAAATATTTGTATGCACTTTTTTGGGGCTTCCAGCAAATCAGTACTCTTGCTGGTAATCTAACCCCAAGTGATTTTGAGTTGGAAGTCCTTTTCACAATGATAATCATAGGATTGGGGCTCTTGCTTTTTGCGCTTCTCATTGGAAACATACAAAACTTTCTTCAGAATCTCGGACAAAGAACACTAGAAATGCAACTTAGAAGCCGTGAAGTTGAGCAATGGATGAACCAGTTTCACTTATCAGAAGATCTAAGAAAGAGGATCAGACATGCCGAAAGGTATAATTGGATGGCAACAATAGGGATGAATGCACAAATGCTTATGGAGAATATGCCAGAAAGATCTGCAGAGAGACATAAGACGTCATCTCTTCGAATTTATTAA 1734 0.3904 MANLEIEEEPMLSSNAQSSHELKYSSFRRILSRRRSASMYIPMVSMEPYYNREPSLGEHSRRQLNSVRTFPPKIDELYATLGTQNIFKQSGVTVTENSENNWDDNYDWEHTPPAVSVGQQGLICNNYFCIRVGTHDNAHQGIPRTPSRFDQEYHDDIHGDEEGFVKKVLSFISSCIPKVISPHSKRVKQWNKIIAIFCLVAIFLDPLFFFIPYVQKDFNCIVINWTRTIPLVVLRSLNDLVYFLNILLQFRLAYVSASTGSRVIDIVDHPKEIAMHYLHSYFLLDLFVVIPLPQIIILFVLPKYLGSSGANHSKNLISAVILVQYIPRLFRFLPLLIGQSPAGIIFESAWASCTLNLLIFMLSGHIVGSCWYLFGLQRVNQCLLDACHNANIIGCMKYVDCGKGHFSHQTQDLWTNNVNATSCLNSLSGSFDYGIYADVVRLTTGSNLIKKYLYALFWGFQQISTLAGNLTPSDFELEVLFTMIIIGLGLLLFALLIGNIQNFLQNLGQRTLEMQLRSREVEQWMNQFHLSEDLRKRIRHAERYNWMATIGMNAQMLMENMPERSAERHKTSSLRIY* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4468 577 Gene3D - 191 508 - -
Amo05g4468 577 Gene3D Helix hairpin bin 510 566 - -
Amo05g4468 577 Pfam Ion transport protein 190 511 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Amo05g4468 577 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 8 563 - -
Amo05g4468 577 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 8 563 - -
Amo05g4468 577 SUPERFAMILY Voltage-gated potassium channels 182 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4468 Amo-Chr5 116043949 116055001 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4468 5 569 Ion Channels AT3G17700 45.656 8.12e-159 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4468 K05391 - ccaj:109789004 625.165