Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4434 ATGGCATTTGTGATAGACTTGAACACGCAGCCATCGTTAGAAGAAATTCACTCATTTGATACCTATATTAATATGGACGATACAAATATTTGTAATAGTTCAAGCAATGATATGGACGATACAAATATTTGTAATAGTTCAAGCAATTCTGCTACAGAAACTGAGTGCACGACTGAGGTCATAATTCATCCCACCATTTCTGATGAGGAGATTCCAAAAGTGGGGATGCTATTTGGAACCCTCGAAGAAGCACGCCAATTTTACTACAACTATGCCAATAAAGTGGGATTCGAGCCTCATATAAGAAACACTAACTTCGACAAGAATGGAAGGACACCCATTAACCAATCCATACAGTGCAATAGAGATGGATACCGAACAAAGAAGAATCTGGTAACCCAAAGGTCAAACACAGTCTCATCTGTACACTGTAAAGCTCGCATCTATGTGAAACTTGACAAAGAGCTTGGAAAATGGAGACTGTCGAAAATAGAATTGGCTCACACGCATCGGTGTGATCCCAGTTTGTCATGGATGTTTAAAAAAATAGAGAACTCTCCATGCACTGCAGATATCTATAATATTCGCAATATATGGGTCCCTAGCATGCATGCTTTCTTTGATAAGTACCTAACGTGTAGGAGCAGTTTAATTCAATTTGTGCACCAGTATGACAATTGTCTTGCAGATAAGGAACAGCAGGAGTTGGAATGCGATGTAGCAGATAATAGGGGCCTGATCCCATGTGCCTCGAACTCACCGATTGAGAAGCAGTTCCAATATGAGTACACGAACTGCATATTTCGCGATGTTCAAGCCGAATTTGTCAAAAAGTGCGACTGCAACCTGTCTCCAAGGGTAGTGAAGGACAACCAATACTTCTATGAAGTGACTCAACAGAAGATAGTTAAGGGGATGTCTATTTACAGCGAGTATGAGGTTGTGTTTTGTCCTATCTCGCACCAGGTTAGGTGCAACTGCTTCAGGTTTGAGTCATATGGTATCCTCTGTTGCCACATCCTATCGATTTTATCCCATTGTAGGGTTGACAAGGTGAACTCGTCGTATATACTATTTCGGTGGAGCAAGAATGTTTATCGTAAGCACACCCATATTAGAAGTAGTCACGACTCACGGCGCTCTGATGAAAGCATGAATATATTTAGGGGACTGTGTGTTGACTTCTACAATGTGGCCCAGGACTTTGTGCATGATAAGGAGGAGGCTGATATATTGCGGTCCGCTTTTACAAGTGCTAAAGTGGCACTTAGCAAACATCGGGCAAAACATTCAGAAAGCATGCGTACAAGTGAGTGTCTTGATGGATTAAATGTTTTGCAGAGCCCTCCTCATGTGGTACCTAGGGGGCGTCCAAGCTTCAAGAGACTGGAGGCGGATGTGGACCGGAAAATTAAGAATGGTACTAAGAAACGTCGAGCTAGTTGTAAACATACAAAGGTTAGTTATGACGGCCAGGGTTTGGACAATTCTCCTGCGCTGGATATATTTTCATGTGTGGAGCCTGTTGAATTTAAGATATTTTCATATGTACAGGAAGTTGCAGCTGTTGAAGGAGACAAACATTCAAACAAGGCCACCGAGAGACGCATTACTGCTAGCAAACACCCTAAGGTTTATTTTACTGTTTATTGCTAG 1656 0.4185 MAFVIDLNTQPSLEEIHSFDTYINMDDTNICNSSSNDMDDTNICNSSSNSATETECTTEVIIHPTISDEEIPKVGMLFGTLEEARQFYYNYANKVGFEPHIRNTNFDKNGRTPINQSIQCNRDGYRTKKNLVTQRSNTVSSVHCKARIYVKLDKELGKWRLSKIELAHTHRCDPSLSWMFKKIENSPCTADIYNIRNIWVPSMHAFFDKYLTCRSSLIQFVHQYDNCLADKEQQELECDVADNRGLIPCASNSPIEKQFQYEYTNCIFRDVQAEFVKKCDCNLSPRVVKDNQYFYEVTQQKIVKGMSIYSEYEVVFCPISHQVRCNCFRFESYGILCCHILSILSHCRVDKVNSSYILFRWSKNVYRKHTHIRSSHDSRRSDESMNIFRGLCVDFYNVAQDFVHDKEEADILRSAFTSAKVALSKHRAKHSESMRTSECLDGLNVLQSPPHVVPRGRPSFKRLEADVDRKIKNGTKKRRASCKHTKVSYDGQGLDNSPALDIFSCVEPVEFKIFSYVQEVAAVEGDKHSNKATERRITASKHPKVYFTVYC* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4434 551 PANTHER OS03G0843700 PROTEIN 50 183 - -
Amo05g4434 551 PANTHER OS03G0843700 PROTEIN 202 387 - -
Amo05g4434 551 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 202 387 IPR031052 GO:0006355
Amo05g4434 551 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 50 183 IPR031052 GO:0006355
Amo05g4434 551 Pfam FAR1 DNA-binding domain 86 173 IPR004330 -
Amo05g4434 551 SMART 26again6 323 350 IPR006564 GO:0008270
Amo05g4434 551 ProSiteProfiles Zinc finger SWIM-type profile. 312 348 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4434 Amo-Chr5 115457857 115460785 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo05g4434 FAR1 9.6e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4434 - K17604 ahf:112774709 588.571