Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4414 ATGCACCAGTCAATTCTTGATGCTATCTGTATGGAATCAAAGTGGAAGCTGTACTTGGCAGACAGTACAATCATGTATCCAGGTGACTTAATAGAGATGATAGTCTTTATTGTGCATGGAAAACTGGAGATCAAGGACAGCAGTGGAACAAGCGTCCACATATCTGACGGGGATGCATGTTGCCAAGAACTCCTTTTCTGGTGTCTTCAGAGAGCTTCATCCAATAGTAGCACAGATGGTGACAAATTATTTTTTCCTGAAGAAAGATTTCTGAGCACCAAGAGTATAACTTGTTTAACAGATGTGGAGGCATTTGTGGTTGAAGTTACTGACCTTGAAAAGATCCTAACTCGGTTTGCAAAATTGTTGCACACTCCACGTATTGAAGAGGCCATAAAAAGGCTGCATGAAGAGTCAGGAAGCAACCAAGAAGAACCACAGAGTGCTACTGTCCCAGAGGAATTACCCTATATATGTTTACATCATTAA 489 0.411 MHQSILDAICMESKWKLYLADSTIMYPGDLIEMIVFIVHGKLEIKDSSGTSVHISDGDACCQELLFWCLQRASSNSSTDGDKLFFPEERFLSTKSITCLTDVEAFVVEVTDLEKILTRFAKLLHTPRIEEAIKRLHEESGSNQEEPQSATVPEELPYICLHH* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4414 162 CDD CAP_ED 1 124 IPR000595 -
Amo05g4414 162 SUPERFAMILY cAMP-binding domain-like 2 123 IPR018490 -
Amo05g4414 162 Gene3D Jelly Rolls 1 121 IPR014710 -
Amo05g4414 162 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 133 - -
Amo05g4414 162 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 20, CHLOROPLASTIC-RELATED 1 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4414 Amo-Chr5 114933829 114934666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4414 1 78 Ion Channels AT3G17700 42.308 9.79e-16 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4414 K05391 - qsu:112012074 124.02