Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4400 ATGAGTGCTTCGACGAGGAAGAAGGTGCAGAGGAAGTGCAAGATCAGAGGGCGCGTCCTCAAAGTCGAAGCTCTTGACGAGATCCTCTCCTTCGTCTCTCGATTCGAAGGCTCCGATGAGGACGAAGCCATCGATCTCCTCCTCGACGAACTCGAACTCGAACTCGAATCTCAGAAATCCACTATAATCGAGAAAGAGCCGGTGCACCGTGTGGTGAGCCGGCTGTTGGAAGCTGATGCGGCTGTCGAGGAGAGCTCCGATCCATGCTCTGCCGGCGGTTCTGCCATTCGCGTCGTCGATGCGTTCCTGGTCCCCAAGTTCAGATACGACCCTATTAGAAAGCAGTTCTACGAGCACACAGGCAGCTTGCCTATTCATGGTGACGCATCAGCAAAAGCGGCCTTGTATAGGGATAGGTTTTTGTTGTTGTTCCAGAGGCTCTCTCGAGATCAGAATTTTTCGAAACCTGCTTTTGAATCAGAATTTTCACATTTTGGGAGCTGTGAGATATCTCCTATCCAATCTCTGGTTGGACAAACGGGTAGAAAATGGGTAATGGGAGTAATATCTCAGCTGGAGGATGGACATTTTTATTTAGAAGATCTTACCGCTTCAGTTGAAATTAATTTGTCTAATGCTAAGATAACTACAGGATTCTTTTCTGAGAACACCATAGTTGTTGCTGAAGGCGAGATGCTGGCATCGGGAATATTTCAGGTTTTAACGTGTGGATTTCCCCCACTGGAGGATAGGGATAAGTCACTTAGACAAATTGCAGGGCATGATTTTTTCGGTAGTGGTACTTTAACGAAAGAGGAAACTATCAGACTGGCAGACATGGAGAAAAAAGCAGTCAATGATATGTTTGTTATTCTGTCTGATATTTGGCTAGACAATGAAGAGGCTATGGGAAAGCTGGAGACTGTGCTTGATGGTTTTGAGAGTGTGGAAGTTGTTCCTTCCTTATTTGTCTTCATGGGGAACTTCTCTTCTCATCCATGTAACCTTGCGTTTCATGCTTATTCAACCCTCAGGTCACAGTTTGGAAAGCTAGGGCAACTAATTGCTGCCCATCCACGGCTAACAGAGCACAGTAAATTCCTGTTTATTCCAGGTCCTGATGATGCAGGCCCTTCAACAGTTCTGCCTAGGCGTGCTCTACCGAAATATTTGACAGAGGAGCTCCAAAATCACATACCAAATGCCATATTCTCAAGCAACCCCTGCAGGGTCAAGTTCTATACTCAAGAAATTGTATTTTTCCGCCAGGATATGCTGTATAGAATGCGTCGATCATGTTTAATGCCACCTTCTATGGAAGAAACTGATGATCCTTTTCAGCATCTTGTGGCTACCATGACCCATCAGTCTCATCTCTGTCCACTCCCTCTAACTGTACAACCGATCATCTGGAACTATGACCACTGCCTTTATCTTTATCCAACTCCGCACACGATTGTCTTGGGAGACAGAAGTCAGCAGAAGGCATTCAAGTACACAGGAATCACTTGTTTCAACACTGGTTCCTTCTCAATTGACAGCACTTTCGTGGCATACCGGCCTTGCTCTCAGGAAGTTGAATTGTCAGCCTTGTAA 1596 0.4586 MSASTRKKVQRKCKIRGRVLKVEALDEILSFVSRFEGSDEDEAIDLLLDELELELESQKSTIIEKEPVHRVVSRLLEADAAVEESSDPCSAGGSAIRVVDAFLVPKFRYDPIRKQFYEHTGSLPIHGDASAKAALYRDRFLLLFQRLSRDQNFSKPAFESEFSHFGSCEISPIQSLVGQTGRKWVMGVISQLEDGHFYLEDLTASVEINLSNAKITTGFFSENTIVVAEGEMLASGIFQVLTCGFPPLEDRDKSLRQIAGHDFFGSGTLTKEETIRLADMEKKAVNDMFVILSDIWLDNEEAMGKLETVLDGFESVEVVPSLFVFMGNFSSHPCNLAFHAYSTLRSQFGKLGQLIAAHPRLTEHSKFLFIPGPDDAGPSTVLPRRALPKYLTEELQNHIPNAIFSSNPCRVKFYTQEIVFFRQDMLYRMRRSCLMPPSMEETDDPFQHLVATMTHQSHLCPLPLTVQPIIWNYDHCLYLYPTPHTIVLGDRSQQKAFKYTGITCFNTGSFSIDSTFVAYRPCSQEVELSAL* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4400 531 Pfam DNA polymerase alpha/epsilon subunit B 289 494 IPR007185 GO:0003677|GO:0006260
Amo05g4400 531 Gene3D - 2 74 - -
Amo05g4400 531 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 6 530 IPR016266 GO:0003677|GO:0006261|GO:0008622
Amo05g4400 531 PIRSF DNA_pol_epsilon_2 1 531 IPR016266 GO:0003677|GO:0006261|GO:0008622
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4400 16 488 Core DNA Replication Machinery Family AT5G22110 70.825 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4400 K02325 - qsu:112038614 887.486