Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4388 ATGCAAAGGCTCACTGCTACAGAGATCTTCTCTGTGACGATCTTCTCTGACCGAGCTCCTCCTCCGACGACCTCCTTTGACCAATTTCCTTCGGCGACGACCTCCTCCAACGGCGACCTCATTCATGACCTCTTTTCCAACGACAATCTCCTCCTGCGACGGTCTCCTCCGGCAACATCTCCTATTGAGATGATCTCCTCCGGTGGCATTCTCCTACGCCGGCAATCTCGTCCATCAAGCTACTGTGTTGTGAGATTCTTCTCCCACAAGCTCGCTAGGGTTTCTGAGGAAGGGATCGTTGAAACATTTCATAATGATGATGATGAAGCACTCGATGCTGCGGAGAATGGAGTTGTGGGAACAGCGTCGGTGGTCCTTGCCGGACTTGTCGCAACCCTGAAATTGATGTTTGTTGGGAGAAAGAAGGGATTGATGGAGGCCTGTAAATTAAAATTAGGAGATCTTAAAGGAGCATTATTTGATTCTAAGTTTGCACTGTGTGGAGAGGACAACAATGTCAAAGCATTATTCCGGCAAGGACAGGCACATATGGCACTCTATGAAATAGATGCTACAACTAAAAACTTTAAAAATGCACTAGTCTTAGAGCCAAATGATGCCAGTTAA 627 0.4705 MQRLTATEIFSVTIFSDRAPPPTTSFDQFPSATTSSNGDLIHDLFSNDNLLLRRSPPATSPIEMISSGGILLRRQSRPSSYCVVRFFSHKLARVSEEGIVETFHNDDDEALDAAENGVVGTASVVLAGLVATLKLMFVGRKKGLMEACKLKLGDLKGALFDSKFALCGEDNNVKALFRQGQAHMALYEIDATTKNFKNALVLEPNDAS* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4388 208 Gene3D Tetratricopeptide repeat domain 144 208 IPR011990 GO:0005515
Amo05g4388 208 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 146 207 - -
Amo05g4388 208 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP40 146 207 - -
Amo05g4388 208 ProSiteProfiles TPR repeat profile. 173 206 IPR019734 GO:0005515
Amo05g4388 208 SUPERFAMILY TPR-like 147 207 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4388 Amo-Chr5 114594333 114598888 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4388 147 206 Calmodulin-binding Proteins AT3G25230 45.000 7.02e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4388 K05864 - aip:107644079 93.2041