Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4376 ATGGATGGGGATAATGGTCTTAACATACGTAATTGGGGTTACTATGAACCTGCTACCTCTTTCAAGAGCCATCTGGGGCTCCAGCTAATGTCATCYATGCCGGAAAAGCCTCTTCTCGGAGGACGCAATGCTGCAGTTTTGTCCGGCACTAATGGTGCCTATCACCATAGGGACATTGGGATGCCCCCGGCTACTTACCCTATGGATTACATGAGGGATGCTTGGATTAGTAGTCAGAGAGAGAAGTATATGAATATGATACCTACAAACCCAAGTTATGGTAGTATTCCGGAGACGTCTTCCACGCATCACATGCAAATGATTCCACCGCCTGAGTTGTCRGCAAAGGAAGAAAGGCCCGTGGAAGAAGCGCCTGTTGTTGAGAAAGCGAACACCACTGGAAAGAAGAGACAGGGTCCCAAGGTTCCGAAATCTCCCAAGGCAAAGAAGCCCAAYAGGGGGCCTCGCGTTCCTAAGGATGAGAATGCTCCTACAGTTCAACGAGCTAGGGCTCCAAAGAAAACTACTGAYATTGTGATAAATGGGATRGACTTGGATATTTCGAGTATTCCAATCCCTGTTTGTTCGTGCACTGGGACACCCCAACAGTGTTACCGATGGGGCTCGGGTGGGTGGCAGTCTGCATGTTGCACAACGGGAATGTCTACATATCCTTTGCCTATGAGTACAAAGCGGCGTGGTGCTAGGATAGCTGGAAGGAAAATGAGTATAGGAGCATTTAAGAAAGTTTTAGAGAAACTTGCAGCTGAGGGTTATAACTTTTCTAATCCAATTGATTTGAGGACTTACTGGGCAAAACATGGTACCAATAAGTTTGTCACTATCAGGTAG 852 0.4671 MDGDNGLNIRNWGYYEPATSFKSHLGLQLMSSMPEKPLLGGRNAAVLSGTNGAYHHRDIGMPPATYPMDYMRDAWISSQREKYMNMIPTNPSYGSIPETSSTHHMQMIPPPELSAKEERPVEEAPVVEKANTTGKKRQGPKVPKSPKAKKPNRGPRVPKDENAPTVQRARAPKKTTDIVINGXDLDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTGMSTYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLRTYWAKHGTNKFVTIR* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4376 283 MobiDBLite consensus disorder prediction 87 175 - -
Amo05g4376 283 PANTHER - 1 283 IPR010409 -
Amo05g4376 283 SMART GAGA_bind_2 1 283 IPR010409 -
Amo05g4376 283 Pfam GAGA binding protein-like family 1 283 IPR010409 -
Amo05g4376 283 MobiDBLite consensus disorder prediction 87 107 - -
Amo05g4376 283 PANTHER PROTEIN BASIC PENTACYSTEINE2-LIKE 1 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4376 Amo-Chr5 114352456 114354275 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4376 1 283 BBR or BPC Transcription factor family AT2G01930 53.177 1.38e-97 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Amo05g4376 GAGA_bind 1.4e-109 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4376 - - gmx:606296 507.294