Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4369 ATGTCAGACCCAAATTCAGTTGATGTGATTTTGGAATTTCTGAGGAGGAACCGGTTCACCCGGGCTGAGGCAGCCTTGCGTAGTGAACTCGGCAACCGTTCTGATGTGAATGGGTTCCTTCAGAAGCTTAAATTAGAGGAAAAGGAATTGTGTAATGTGTCGCATGATGATAAGGGGACGACAGTGCTAGAAAGCCGTGGCTCGGATTCTCGTGATAGTGTTGATGGTTCTAAAGAGCTGATTGTGAAGGAAATAGAGTATGGAACTAGTAGAAATAATGTTGAAAGCAAACGGAAAGCTGCTGCTTCTACAGGGGAGCGTAATCAATCCAACGAAGTGGGTGGAACAAGTGACAAAAACTTCAGTTTCTCAAAGGGTTCGGAGGACAATCTTCTTGATTTGAACTCATGGAAGTTTGGCCCTGGAAATGGTCCAGCGGAGCCTTACCAAACTTATGGTGGGAGTGGGGCTAGTAATATGTTGAAGACCCCGATGTCTCAGCAATCAAAATCTCAAACAAGTGAAGCTGTTGATGCAGCCAACAGGAAAGCAAAATCTGGGGAGGAAAATGCTGTGCCTATGGAAAGAAATTCCACTTGGCTTGGAAGTAGTAGTAAAGCCACTGCTGAACCAAAGTATGAGCTCATTCAAAGCAAAGAACCTAGGGAACTGGATCGACAGCTAAAATTTAGTAGTTCTTCTCTGAAAGAGAACTTGGTCGATAATGCTTTGTCGAGAAATGATGATAATGTGAATTTGTCATTGGACCCGTGGAAAGATTGTTCCGTGAAGACTGTTTTCCCGTTCTCAACGGGAACAGGGGATGTGTCTACGAGCTATAATGGGTCAACTTATTTAGGCAGAAAAGAGGAGAAGAGAAAGGAAGAAACAAGTGATGCCAGAGCAGCAATAAAAGAGCAGGTGGATGAAGTGGGGAGGGCTTTGTACTTAGGAAAGTTGCAAGGCAGTTCCGAACAGAATAATTTCAGCAGCCTAAGTTTCCCTCTTTCACCAGAGAACCAGAAGGAAGAATTTCCTCGGCTTCCTCCTGTTAAGATCAAGTCAGAAGATAAGCAGTTGGCTATTAATTGGGAGGAGAAGTTTGAGCGCGATGGACTGTCCGCAAAACTCAGTGGTTCTACTGACAACACTTTGCTTATTGGGTCATATTTGGATGTGCCCATTGGACAAGAAATTAAAACTGCAGGTATGAGGAGGCCTTCAGGGGGTAGTTGGCTGTCTGTGAGTCAAGGGATTGTAGAGGATACATCTGATCTTGTATCTGGTTTTGCAACAATTGGCGATGGGTTGAGTGAATCTATTGACTATCCAAATGAATATTGGGACTCTGATGAATATGACGATGATGACGATGTTGGGTACATGAGACAACCCATTGAGGATGAGGCCTGGTTTTTGGCACATGAAGTTGATTACCCTAGTGACAATGAAAAGGGGACCACACATGGAAGTGTTCCAGATCCTCAGGAAAGAGGTCCGGCCAAAGATGACGATGATGATCAGTCTTTTGCTGAGGAGGATTCTTATTTCTCTGGAGAGCAATATCTTCATGCGAAGAATGCCGAGCCAGTCACTGTTTCAGATGATCCCATTGGTCTTACGGTTACGGAAATGTATGGAGGAACGAATGATATTGACACAATTGGTCAATACAATGGACAATTGATTGACGATGAAGAATTGAATCTGATGCGAGTGGAACCTGTATGGCAGGGGTTTGTCTCCCAGACAAATGATCGCACCATGTTAGTAAATGGGAAGCTTCTAAATGATAGTGGAAGATCACGACTTGAAGATATCTGTATGGAAGATGATCAGCATGGTTCGGTTAGGTCAATTGGAGTGGGGATTAACAGTGATGCTGCTGACTTTGGCAGTGAAGTGCATGGAAGTTTGATTGGGGGTAGTAGTGAAGGGGATTTAGAATATTTCCGTGATCGAGATGTCGGGATTGGTGGCTCCAAACACAGTCATGATTTGGATAGCATTTCGAACAAATCGATAAAAAGCAAGAAAAAAAGTGACAAGAGTGAGTTGAATAAATACATCATTGGGGGTGATAAAGATGCACGCTTACAGATGAAAACAAATAATGATGTGAACTTCTCATTCCCCCAAACTTTAAATGATGGCCAGATTATTCAAGCTGGTCCCAGTAAGGCTCTATGGTCAAGTAGTTGTAATGTGGACGAAAGAGATGACCGTCTTAATGCATATGTGGGAACCAATGACATGCTTTCTTCTTGGAGGCGAAAGAGCAGCGATTCTTCTCCCGTTAAAAGTTCTAGGGATGATAATAATGCTAATATGGTAAGGTCAACAAACTCTTCGCCGACCACATTATCAAATTATGGGTATACTGAAACAGATCATGCCAAGCTAGAAGAGGATGAAAAAGGTGGCACTGAAAGGGAAGATGAACTAGGCGCCTCACTAGATGATGAAGAGGCTGCTGCTGTGCAAGAGCAGGTAAGGCAAATAAAAGCGCAGGAGGAGGAGTTTGAAACCTTCAATCTGAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAAGACAAGCATTTCCATGTTGTTTTGAATTCGGTAATAGCCGGCCGTTATCATGTCACTGAGTATCTGGGATCTGCTGCATTTAGCAAAGCTATACAAGCTCATGACCTGCACACGGGCATGGATGTTTGTGTTAAAATTATAAAAAACAACAAGGACTTCTTTGACCAAAGCCTTGATGAAATCAAGCTTCTGAAGTATGTCAATAAGCATGATCCCGCTGACAAGTATCACCTTCTGCGATTATATGATTATTTCTATTATAGAGAACATTTGTTAATAGTATGCGAGCTACTTAAAGCCAATTTGTACGAGTTTCATAAATTCAACAGAGAATCAGGCGGTGAAGTCTACTTCACAATGCCTAGATTACAGTCAATTACCATTCAGTGTTTGGAAGCACTTCAGTTTTTGCACAGCCTTGGACTAATACATTGCGACCTAAAGCCGGAGAACATTTTGGTTAAAAGCTATAGCAGATGTGAGGTGAAAGTCATTGATCTTGGAAGTAGTTGTTTTGAGACGGATCACCTTTGCTCCTATGTTCAGTCCAGGTCCTATCGTGCACCTGAGGTCATTTTGGGGCTTTCATATGACAAGAAGATTGATATTTGGTCACTTGGATGCATCTTGGCAGAACTTTGCACTGGCAATGTTCTTTTCCAAAATGATTCCCCTGCAACATTACTCGCCCGGGTGATTGGGATCATTGGTCCAATTGATCAAAGTATGCTTGCAAAGGGACGAGATACATACAAGTACTTCACCAAAAATCATATGCTTTATGAACGGAATCAGGAATCCAACAAGTTAGAATACCTGATCCCGAAAAAGACGTCATTGAGGCATAGATTGCCTATGGGAGATCAAGGTTTCATTGATTTTGTTGCTCATTTGCTCGAGGTTAACCCAAAGAAGCGGCCCTCTGCGGCTGAGGCCTTGAAGCACCCTTGGTTATCATACCCCTATGAACCCATATCATCTTGA 3561 0.428 MSDPNSVDVILEFLRRNRFTRAEAALRSELGNRSDVNGFLQKLKLEEKELCNVSHDDKGTTVLESRGSDSRDSVDGSKELIVKEIEYGTSRNNVESKRKAAASTGERNQSNEVGGTSDKNFSFSKGSEDNLLDLNSWKFGPGNGPAEPYQTYGGSGASNMLKTPMSQQSKSQTSEAVDAANRKAKSGEENAVPMERNSTWLGSSSKATAEPKYELIQSKEPRELDRQLKFSSSSLKENLVDNALSRNDDNVNLSLDPWKDCSVKTVFPFSTGTGDVSTSYNGSTYLGRKEEKRKEETSDARAAIKEQVDEVGRALYLGKLQGSSEQNNFSSLSFPLSPENQKEEFPRLPPVKIKSEDKQLAINWEEKFERDGLSAKLSGSTDNTLLIGSYLDVPIGQEIKTAGMRRPSGGSWLSVSQGIVEDTSDLVSGFATIGDGLSESIDYPNEYWDSDEYDDDDDVGYMRQPIEDEAWFLAHEVDYPSDNEKGTTHGSVPDPQERGPAKDDDDDQSFAEEDSYFSGEQYLHAKNAEPVTVSDDPIGLTVTEMYGGTNDIDTIGQYNGQLIDDEELNLMRVEPVWQGFVSQTNDRTMLVNGKLLNDSGRSRLEDICMEDDQHGSVRSIGVGINSDAADFGSEVHGSLIGGSSEGDLEYFRDRDVGIGGSKHSHDLDSISNKSIKSKKKSDKSELNKYIIGGDKDARLQMKTNNDVNFSFPQTLNDGQIIQAGPSKALWSSSCNVDERDDRLNAYVGTNDMLSSWRRKSSDSSPVKSSRDDNNANMVRSTNSSPTTLSNYGYTETDHAKLEEDEKGGTEREDELGASLDDEEAAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKHFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKYHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLSYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQSMLAKGRDTYKYFTKNHMLYERNQESNKLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEVNPKKRPSAAEALKHPWLSYPYEPISS* 1187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4369 1186 PANTHER - 2 1184 - -
Amo05g4369 1186 Gene3D Phosphorylase Kinase; domain 1 869 956 - -
Amo05g4369 1186 MobiDBLite consensus disorder prediction 94 125 - -
Amo05g4369 1186 MobiDBLite consensus disorder prediction 796 814 - -
Amo05g4369 1186 MobiDBLite consensus disorder prediction 58 77 - -
Amo05g4369 1186 SUPERFAMILY Protein kinase-like (PK-like) 862 1179 IPR011009 -
Amo05g4369 1186 MobiDBLite consensus disorder prediction 92 125 - -
Amo05g4369 1186 PANTHER DUAL SPECIFICITY PROTEIN KINASE 2 1184 - -
Amo05g4369 1186 CDD PKc_DYRK_like 875 1177 - -
Amo05g4369 1186 SMART serkin_6 875 1177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4369 1186 MobiDBLite consensus disorder prediction 755 794 - -
Amo05g4369 1186 MobiDBLite consensus disorder prediction 152 179 - -
Amo05g4369 1186 MobiDBLite consensus disorder prediction 145 190 - -
Amo05g4369 1186 Pfam Protein kinase domain 875 1177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4369 1186 Gene3D Transferase(Phosphotransferase) domain 1 929 1177 - -
Amo05g4369 1186 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1001 1013 IPR008271 GO:0004672|GO:0006468
Amo05g4369 1186 MobiDBLite consensus disorder prediction 755 821 - -
Amo05g4369 1186 Coils Coil 827 847 - -
Amo05g4369 1186 MobiDBLite consensus disorder prediction 480 511 - -
Amo05g4369 1186 ProSiteProfiles Protein kinase domain profile. 875 1177 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4369 Amo-Chr5 114148773 114156664 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4369 874 1172 MAP Kinase Gene Family AT5G19010 30.721 1.01e-29 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Amo05g4369 Pkinase 8.6e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4369 - - gmx:100786225 1829.68