Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4345 ATGGATTCAAAGACGCCGCAACGGCGTCGTCCAAGCAGTGTCATCCAAAATGGCACCGTTATCAGAGAGAAGAAGCCCAAACGTAGCGAGGTCCTCGCAAAGAAGAAAGCCGTTGAGCAATCCATCAAATCAGCACGTGCCGAAAAGGATCACCTTGCTTCCTTCCCTGAGTTCCGCCACTTCGTCAATAACGGTCTATCTATGTGTTTGAAGTCAGGACGCGGTGATACACTATCCTCTCCTGTTAAGCACTATGTTCAGAGCCTCCTTAAGCTAAATATGGAAGGACCCTATGGATCTGAGTGGTTGGATGAAGAAAAGGTGAAGCGCAGAGAAATGGTTGCTCCAGAAGCACACTATATATTTGTGCATGAGGATGCCAATTCAGTTGGTGATGAGACAAGAATGATGTTGAATGCAGAAGAGGCTTCAACTAGTTGTGTAGAAGATAGTGGCCCCTTAGTTGGATTTCTACATTACCGTTTTGTTCTGGAAGAAGATGTACCGGTCCTTTATGTGTATGAGTTGCAGATTGAGCCTCGTGTCCAAGGAAAAGGGTTAGGGAAGTTTCTAATGCAACTAATTGAGCTTATTGCCCAAAAGAAGTGCATGGGTGCTGTCATGCTAACTGTTCAAAAAGCAAATTTACTAGCTCTGAATTTCTATCTAAGTAAGCTGAGATACATCATATCAACCATTTCGCCTTCAAAGATGGGGATTGAGAAGAGTTACGAAATTCTTTGCAAAACATTTAATGACGAAGCTAAAACTATTTTGGAGGTACAGCTCCTATCCGCACGCACCATTAGATTGATTTTATCAGATAGTCTATCACTGATTTCACAAAACACACTAATTTACAGCCATCTGGATCACTCAGGTTTAAGGTTAAATCACTATATGACATTTTCCTTTTTGGTTCTCAAATCACAATTCACATTATATGATTTAAACGATTATTCTCATAAGAACTATGCCTATTTTTAA 987 0.4093 MDSKTPQRRRPSSVIQNGTVIREKKPKRSEVLAKKKAVEQSIKSARAEKDHLASFPEFRHFVNNGLSMCLKSGRGDTLSSPVKHYVQSLLKLNMEGPYGSEWLDEEKVKRREMVAPEAHYIFVHEDANSVGDETRMMLNAEEASTSCVEDSGPLVGFLHYRFVLEEDVPVLYVYELQIEPRVQGKGLGKFLMQLIELIAQKKCMGAVMLTVQKANLLALNFYLSKLRYIISTISPSKMGIEKSYEILCKTFNDEAKTILEVQLLSARTIRLILSDSLSLISQNTLIYSHLDHSGLRLNHYMTFSFLVLKSQFTLYDLNDYSHKNYAYF* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4345 328 PANTHER - 22 257 IPR039949 GO:0010485|GO:0043998
Amo05g4345 328 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 135 224 IPR016181 -
Amo05g4345 328 Coils Coil 28 48 - -
Amo05g4345 328 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 106 259 IPR000182 GO:0016407
Amo05g4345 328 CDD NAT_SF 148 210 - -
Amo05g4345 328 Gene3D - 61 254 - -
Amo05g4345 328 MobiDBLite consensus disorder prediction 1 34 - -
Amo05g4345 328 Pfam Acetyltransferase (GNAT) family 142 222 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4345 Amo-Chr5 113835023 113839277 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Amo05g4345 Acetyltransf_1 2.2e-09 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4345 K20794 - gmx:100500318 344.354