Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4312 ATGCATGCAAGAGTCATTCACTTCATTTACTTCCAAAAGTGGGAGCATCTCAATCTCACTGACCTCATCATCCTTCAATATATCTATCTATCTATCTCATCTATTTATTTAGTGGTATATCAAAGGTTTGTTCTCATCCCCTCAAAAATAGTCATGGAATCTAATAAGAGGAATAGTGTTAATAATAATAGCCAGAACTACCAACAAGAACAATTTCAATTTGAAGAGGAACATGAACAGGAACAAGATCAAGAAGCAGCATGTTATGAAGAAGAAGAAGAAGAGGAAGATCAAGATGATGAAAAAAATAATGAGATCCTCAAGAGAAGAATCTCTAATCACCCTCTCTATGGACTCTTGGTTGAAGCTCACTTGGAGTGTTTGAAGGTTGGTGACATATCGAACTTGGACAGACAGCTGAAGATAGATCCAATGCAAGCAATGAAGCAACAAAACTTGAACATGTTCAGCCAATCAGAGCTTGATATCTTCATGGAAGCATATTGCATGGCACTTGGGAAGCTGAAAAAAGCAATGGAGGAACCGCAACAGAAGTCAATGGCTTTCATAAACAACATGCATTCACAACTCAGGGAGCTGACCACCAAGGCCACCGCCATGCCTCCTCCTTCTGAAGCTTCTGGTGCTTCTTCAAGTAGTAGTGACTGCAAGTTCAGAAGAAACCCTAATATCTAG 696 0.3951 MHARVIHFIYFQKWEHLNLTDLIILQYIYLSISSIYLVVYQRFVLIPSKIVMESNKRNSVNNNSQNYQQEQFQFEEEHEQEQDQEAACYEEEEEEEDQDDEKNNEILKRRISNHPLYGLLVEAHLECLKVGDISNLDRQLKIDPMQAMKQQNLNMFSQSELDIFMEAYCMALGKLKKAMEEPQQKSMAFINNMHSQLRELTTKATAMPPPSEASGASSSSSDCKFRRNPNI* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4312 231 MobiDBLite consensus disorder prediction 205 231 - -
Amo05g4312 231 Pfam KNOX2 domain 158 201 IPR005541 GO:0003677|GO:0005634
Amo05g4312 231 PANTHER FUSED COMPOUND LEAF 1 85 204 - -
Amo05g4312 231 SMART KNOX2_2 151 202 IPR005541 GO:0003677|GO:0005634
Amo05g4312 231 MobiDBLite consensus disorder prediction 71 103 - -
Amo05g4312 231 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 85 204 - -
Amo05g4312 231 Coils Coil 64 110 - -
Amo05g4312 231 SMART KNOX1_2 105 145 IPR005540 GO:0003677|GO:0005634
Amo05g4312 231 MobiDBLite consensus disorder prediction 76 101 - -
Amo05g4312 231 Pfam KNOX1 domain 107 131 IPR005540 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4312 Amo-Chr5 113096230 113102221 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4312 105 200 Homeobox Transcription Factor Family AT4G08150 36.893 1.75e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4312 - - aip:107642073 248.825