Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4310 ATGAATAGCTTACAATGGAAGAAACTGAAAGTCTTGGGAGCGGGTTCTTATGGCATTGTTTATCTTGCAATTGTTGTTGATACACAAACACACTATCAGAGCTTTATTGCTGTGAAGAGCTCCATTCTCATGTTGGCATTCTCACTGAAGACAGAAGAACAGATTTTTAAATCATTGTGCAAAGAGCATGGACGTTACTTTTACAATCTTCTATTTGAGTATGCTCCTCACGGTTCTTTGGATGACTTGATCCACAAGAAACCTCTCCCAGAGACCGACGTGAGTGTCTATGCACGCATGATTGTTAAAGGGCTTTCACATATTCATCGCAAAGGAGAAGAAAGTGTTGATGAATAA 357 0.395 MNSLQWKKLKVLGAGSYGIVYLAIVVDTQTHYQSFIAVKSSILMLAFSLKTEEQIFKSLCKEHGRYFYNLLFEYAPHGSLDDLIHKKPLPETDVSVYARMIVKGLSHIHRKGEESVDE* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4310 118 Gene3D Transferase(Phosphotransferase) domain 1 1 116 - -
Amo05g4310 118 ProSiteProfiles Protein kinase domain profile. 6 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4310 118 Pfam Protein kinase domain 7 112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4310 118 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 5 112 - -
Amo05g4310 118 SUPERFAMILY Protein kinase-like (PK-like) 6 112 IPR011009 -
Amo05g4310 118 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 5 112 - -
Amo05g4310 118 ProSitePatterns Protein kinases ATP-binding region signature. 12 39 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4310 Amo-Chr5 113029284 113029697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4310 4 112 MAP Kinase Kinase Kinase AT4G36950 34.921 1.56e-16 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Amo05g4310 Pkinase 3.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4310 - - ahf:112803911 227.639