Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4296 ATGTGTTTGAGATCATTCAGGTGCAGTTTTTGCTGCATCTTCGTCACACTCTACACCTTATTCCTGTGCTTCATTCTATCCATATTCCTATTTTGGATAATCATATCTCCATCAAGTGTCAAATTCCAAGTAACCAATGCTTCCCTCACTCAATTCAATCTCACCAACAACAACACCACATTGAACTACAAATTCAAAGTCAACATCACAGCAAGAAACCCTAACAACAACGTGGTGGTGTACTATAGGAGGATCACCGCATACGCGTGGTACAAAGACAGGAATTTCGCTGCCGTCAACTTGGCGCCATTTGATCAAGGTCACAAGAACACGACCCTCCTTCAAGAAGCCCAAATTGCTGAGTACAACATGGAGAGGAGTGTGGGCATTTTCAATGACTTGGCCGTCGATTTGGATGTTAGAATAAGGGCTAAGTTTGGAAGGTTCAAGAGCAGCCGATTCAATCCGCCGGTTGTTCAGTGTCGCCGGCTCAGGGTTCCTTTGATTTCGAATGGTAAACCGCCGGCGGCAACTTTTAGTGTTACAAGGTGCAGAAGTAGTAATTTCTTTCAAGATCGTGATGCCGAAGCCGGATAA 597 0.4456 MCLRSFRCSFCCIFVTLYTLFLCFILSIFLFWIIISPSSVKFQVTNASLTQFNLTNNNTTLNYKFKVNITARNPNNNVVVYYRRITAYAWYKDRNFAAVNLAPFDQGHKNTTLLQEAQIAEYNMERSVGIFNDLAVDLDVRIRAKFGRFKSSRFNPPVVQCRRLRVPLISNGKPPAATFSVTRCRSSNFFQDRDAEAG* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4296 198 Pfam Late embryogenesis abundant protein 68 152 IPR004864 -
Amo05g4296 198 PANTHER OS05G0367900 PROTEIN 19 189 IPR044839 GO:0098542
Amo05g4296 198 PANTHER HARPIN-INDUCED 1 19 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4296 Amo-Chr5 112770819 112771454 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4296 34 168 SNARE and Associated Proteins AT1G32270 29.252 3.44e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4296 - - ahf:112749063 257.299