Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4292 ATGTGTTTGAGATCATTTAGGTGCAGTTTTTGCTACATCTTCGTCATACTCTTCACCTTATTCTTGTGCTTCATTATATCAATATTCCTATTTTGGATAATCATATCTCCATCAAGTGTCAAATTCCAAGTAACCAATGCTTCCCTCACTCAATTCAATCTCACCAACAACAACACCATATTGAACTACAAATTCAAAGTCAAAATCACAGCAAGAAACCCTAACAACAACGTGGTGGTGTACTATAGGAGGATCACCGCATACGCGTGGTACAAAGACATGAATTTCGTTGCCGTCAACTTGGCGCCATTTGATCAAGGTCACAAGAACACGACCCTCCTTCAAGAAGCCCAAATTGCTGAGTACAACATGGAGAGGAGTGTGGGCATTTTCAATGACTTGGCCGTCGATTTGGATGTTACGATAAGGGCTAAGTTTGGGAGGTTCAATAGCATCCGGTTCAATTCGCAGTTTTGGCAACATTTAATGTTAGAAGGTGTAGTAGTCCTTATTTCTTTCAGGATCGGGATGATGAGGGATAGGCCCGTATTAAATATAAATTTTGAGTATTTGAATGTGAATTTGCAATTATATATGGCATAA 603 0.393 MCLRSFRCSFCYIFVILFTLFLCFIISIFLFWIIISPSSVKFQVTNASLTQFNLTNNNTILNYKFKVKITARNPNNNVVVYYRRITAYAWYKDMNFVAVNLAPFDQGHKNTTLLQEAQIAEYNMERSVGIFNDLAVDLDVTIRAKFGRFNSIRFNSQFWQHLMLEGVVVLISFRIGMMRDRPVLNINFEYLNVNLQLYMA* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4292 200 PANTHER HARPIN-INDUCED 1 19 159 - -
Amo05g4292 200 PANTHER OS05G0367900 PROTEIN 19 159 IPR044839 GO:0098542
Amo05g4292 200 Pfam Late embryogenesis abundant protein 68 145 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4292 Amo-Chr5 112695522 112696212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4292 34 115 SNARE and Associated Proteins AT1G32270 35.366 1.02e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4292 - - ahf:112749063 196.823