Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4288 ATGGTCTTCAAGGGGAGATTCTTTTCCTCCAAGAAATCCGATTCCGATGGCTCCTCCAACAGTCCCCGATCCCTCCCCTCCAACTCCCCTTCCAGATCCGACAAGAAGAAGTCCAAATCCCTAACCCCTCCCGCCGCCGCCGCCGCACCCGTCGCGTGCCGGCAGACGCAGGTCAAGGACGCGACCACCAAGAAGAAGGACGCAGTTAAGGGGAAGGAAGGTCAGGCTCAGGCTCCACCTGGCGGCAAGGATTCCGCGTCTTCATTGAAGTCTAAGAAGTCTTTGACGGCGGCGGTGGCGGCAGCGGCTGCGGCGGAAGGAGGAGTCAAGGATTCTACGTCGCCGTCGCCGTCGTCGTCGTCCTCGGTGTCGGTGTCGCCGATCCTGGCTTCGTCGCTAGGGTTGAACAGAATCAAGACGCGATCGGGGCCGTTGCCGCAGGAGAGCTTCTTCGGGTTCAGGGGAGATAAAGGACCGGCTGCGGCTCTCGGTGCTAGCAACCTTTCGAGGCCTGGAGGTGGCGGCGGCGACGGGAGTTCGGGTTCCGGCAGCGGCGGGAAGAAGAAAGAGGGCAGAGTAGGGTTTCAGGAGGGTTTCGCAGCGGGTTCTGGCACCGGTTGGATTGATAATGGGAGCAATTCAGATAGTATGTCCACCGGGAGTGGACCTTCTAGGGAGCAGAGCCCGATTGTGTTGCCAAGGTCGCGGCTGCAGAACGGAGAATCATCCTCCGATGCAGGGAGACAGACTTCGTCATGGGCTCACACTGGAGGGGTAAGAGGCCCTGATTGCACTCCTGAGACAGCATATGATTACGAAAACCCCAAGGAATCTGAATCTCCTCGCTTTCAAGCTATCTTGCGGGTCACAAGTGCACCCCGAAAGAGGTTTCCCGCAGACATCAAGAGTTTTTCTCATGAGTTGAATTCCAAAGGTGTCCGACCTTTTCCGTTTTGGAAGCCTCGAGGGTTAAATAATGTGGAGGAAGTATTGGTTGTTATAAAGGCAAAATTTGATAAGGCAAAGGAAGAAGTGAACTCTGATCTGGCTATTTTTGCAGCCGACCTGGTTGGAATTCTTGAAAAAAATGCAGATACTCATCCTGAGTGGCAGGAGACAATTGAGGACTTGCTGATTTTGGCTAGGAGCTGTGCTATGTCTTCGGCTGGGGAGTTTTGGCTGAGGTGTGAAAGCATAGTCCAGGAGTTGGATGATAGGCGTCAAGAGCTTCCTCCAGGGATGCTAAAGCAGCTTCATACTCGAATGCTATTTATTCTTACTAGGTGTACTAGATTATTGCAGTTCCACAAGGAAAGTGGTTTGGCCGAGGATGAACATGTTTTCAATCTCCGTCAATCTAGAGTCTTGCATTCTGCTGAAAAGGCTGTTCCCCCTGGTTTGGCAAGGGATGTTAAAAACTCTAGTGCTGCAAAAGCCTCAAAGTCCTCAACCAAAAAGGCATATAGTCAGGAACAAAGAACGTTGAATTGGAAGAAAGGAGTCACACAATCAGAAAACTTATCTCTTCCTGCTGATGATGACCCTTCAAAACATTTTGAGCCTCCTTCAGGGAGGGACCGGATGGCTTCTTGCAAGAAATTCCCGTCGCCAACAGGGAAAAGCCCAAAAGAAGCTGATCAGTTGAAGGAGCATGGTTATGGAAAGGTTGAACCACCAAAAACTTCAAGTAGTAAGAGATTCAGTTCCGATGGTGATCTTTCTTCTGCTAAGCCACCTGAGCTTCTTCCTGCCAAAGATTCCCAGGATCATGCTTCCAAGCACCACCATAAAGTTTCCTGGGGATACTGGGGAGATCAGCAGAATAATAGTGAGGAGAGCTCAATAATTTGTCGTATATGTGAGGAAGAAGTAGCTACTTCACATGTTGAGGATCATTCAAGGATTTGTTTAGTTGCTGATCGATGTGATCAGAAGGGTCTGAGTGTTAATGAACGTCTTGTTAGAATTGCTGAAACACTAGAAAAGATGGAGTCATGTACACAAAAGGATACCCAACAAATAGTGGGAAGTCCAGATGTTGCAAAAGTGTCAAATTCAAGCATGACTGAAGAATCTGATGTAGTTTCCCCTAAACTTAGTGATTGGTCTCGCAGAGGATCAGAGGATATGCTAGACTGTTTCCCCGAAGATGATAATTCTGTGTTTATGGATGACCTAAAGGGTTTACCACTTATGTCATGTAAAACTCGTTTTGGTCCGAAGTCTGAGCAAGGTATGACAACATCATCTGCAGGGAGCATGACTCCTAGGTCTCCTTTAATGACACCAAGGACAAGTCAGATTGAAATGCTCTTGGCAGGAAAGGGTGCTTACTCCGAACATGATGATCTGCCACAGGCATGCTCTGCCTTTTACCTCTTCTATAAAATTATTATGAATGAACTTGCTGATATAGCACGCTGTGTCGCAAACGCACCTCTGGATGATGATCGCTCAACATCATATTTATTATCTTGTCTTGATGACTTACGAGTTGTTGTAGACCGGAGGAAATTTGATGCACTTACTGTGGAGACCTTTGGAACACGTATCGAGAAGCTGATACGTGAGAAGTATTTGCAGCTTACTGAGATGGTGGATGTAGAAAAGATAGATATGGAGAGCACTGTAATGGATGATGATGTCATCTTGGAAGATGATGTGGTCCGTAGCTTGAGAACAAGCCCAATCCATTCTTCAAGGGACCGTACCTCTATTGATGACTTTGAGATCATAAAGCCTATAAGTCGTGGGGCATTTGGACGGGTTTTCCTGGCCAAAAAGAGAACAACTGGTGATCTTTTTGCAATTAAGGTTCTGAAGAAGGCTGACATGATTCGTAAGAATGCTGTGGAAAGTATATTAGCAGAACGTGATATCTTAATTACAGTTCGGAATCCTTTTGTGGTTCGTTTCTTCTATTCTTTCACATGCCGTGAGAACTTGTATCTTGTCATGGAGTATCTTAATGGAGGTGACCTATATTCGTTATTAAGGAATTTAGGTTGCTTAGACGAGGAAGTTGCTCGCGTGTATATTGCTGAAGTGGTTCTCGCATTAGAGTATTTGCATTCACTACGGGTGGTTCATCGAGACTTGAAACCTGACAATTTACTGATCGCCCATGATGGTCACATTAAGCTAACAGATTTCGGGCTTTCCAAAGTCGGTCTCATCAACAGCACGGATGATTTATCTGGTCCAGCAGTGAGTGGGACATCCTTGCTTGGGGAGGATGAGCCTAACATGTCTACATCTGAGCATCAAAGGGAACTGAGGAAGAAAAGATCTGCTGTAGGTACCCCTGATTATTTGGCGCCAGAGATTCTTTTGGGAACTGGACACGGGTATACGGCTGATTGGTGGTCTGTTGGGGTCATTTTATTTGAGTTGCTTGTTGGTCTTCCACCTTTTAATGCAGAGCATCCTCAGACTATATTTGATAATATTCTTAATCGTAAGATACCTTGGCCTGCAGTTCCTGAAGAAATGAGTCCTGAAGCTCAAGATCTTATTGATCGATTATTGACTGAAGATCCTAACCAAAGACTTGGAGCTAGAGGTGCATCAGAGGTGAAAGAACATGTTTTCTTTAAGGATATAAATTGGGACACACTTGCTAGACAGAAGGCTGCATTTGTTCCTGCTTCTGAGAGTGCTCTAGACACTAGTTACTTCACTTCTCGCTACTCATGGAATACTTCAGACGGTCTTGTATATCATGCAAGTGATGCTGAGGATTCTAGTGATGCTGATAGCTTAAGTGGTAGCAGTAGTTGCTTGAGCAATCGCCAAGATGAAGTGGGAGATGAATGTGGGGGTCTTGCTGAGTTTGATTCCAGCTCATCAGTCAACTACTCTTTTAGTAATTTCTCTTTTAAGAATCTCTCCCAGCTTGCATCAATCAACTATGATCTTCTCTCCAAGGGATGGAAAGATGATCCACCAGCAAATCCCGGAGCATAG 3966 0.465 MVFKGRFFSSKKSDSDGSSNSPRSLPSNSPSRSDKKKSKSLTPPAAAAAPVACRQTQVKDATTKKKDAVKGKEGQAQAPPGGKDSASSLKSKKSLTAAVAAAAAAEGGVKDSTSPSPSSSSSVSVSPILASSLGLNRIKTRSGPLPQESFFGFRGDKGPAAALGASNLSRPGGGGGDGSSGSGSGGKKKEGRVGFQEGFAAGSGTGWIDNGSNSDSMSTGSGPSREQSPIVLPRSRLQNGESSSDAGRQTSSWAHTGGVRGPDCTPETAYDYENPKESESPRFQAILRVTSAPRKRFPADIKSFSHELNSKGVRPFPFWKPRGLNNVEEVLVVIKAKFDKAKEEVNSDLAIFAADLVGILEKNADTHPEWQETIEDLLILARSCAMSSAGEFWLRCESIVQELDDRRQELPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDEHVFNLRQSRVLHSAEKAVPPGLARDVKNSSAAKASKSSTKKAYSQEQRTLNWKKGVTQSENLSLPADDDPSKHFEPPSGRDRMASCKKFPSPTGKSPKEADQLKEHGYGKVEPPKTSSSKRFSSDGDLSSAKPPELLPAKDSQDHASKHHHKVSWGYWGDQQNNSEESSIICRICEEEVATSHVEDHSRICLVADRCDQKGLSVNERLVRIAETLEKMESCTQKDTQQIVGSPDVAKVSNSSMTEESDVVSPKLSDWSRRGSEDMLDCFPEDDNSVFMDDLKGLPLMSCKTRFGPKSEQGMTTSSAGSMTPRSPLMTPRTSQIEMLLAGKGAYSEHDDLPQACSAFYLFYKIIMNELADIARCVANAPLDDDRSTSYLLSCLDDLRVVVDRRKFDALTVETFGTRIEKLIREKYLQLTEMVDVEKIDMESTVMDDDVILEDDVVRSLRTSPIHSSRDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIAEVVLALEYLHSLRVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTSLLGEDEPNMSTSEHQRELRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGLPPFNAEHPQTIFDNILNRKIPWPAVPEEMSPEAQDLIDRLLTEDPNQRLGARGASEVKEHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGLVYHASDAEDSSDADSLSGSSSCLSNRQDEVGDECGGLAEFDSSSSVNYSFSNFSFKNLSQLASINYDLLSKGWKDDPPANPGA* 1322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4288 1321 MobiDBLite consensus disorder prediction 679 701 - -
Amo05g4288 1321 MobiDBLite consensus disorder prediction 679 696 - -
Amo05g4288 1321 MobiDBLite consensus disorder prediction 1 278 - -
Amo05g4288 1321 ProSiteProfiles Protein kinase domain profile. 909 1198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4288 1321 Gene3D Phosphorylase Kinase; domain 1 907 1227 - -
Amo05g4288 1321 MobiDBLite consensus disorder prediction 1249 1265 - -
Amo05g4288 1321 MobiDBLite consensus disorder prediction 470 593 - -
Amo05g4288 1321 SMART serkin_6 909 1198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4288 1321 Gene3D Transferase(Phosphotransferase) domain 1 993 1216 - -
Amo05g4288 1321 Pfam Protein kinase domain 909 1198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4288 1321 MobiDBLite consensus disorder prediction 739 760 - -
Amo05g4288 1321 CDD STKc_MAST_like 915 1203 - -
Amo05g4288 1321 MobiDBLite consensus disorder prediction 1246 1266 - -
Amo05g4288 1321 MobiDBLite consensus disorder prediction 511 527 - -
Amo05g4288 1321 Coils Coil 324 344 - -
Amo05g4288 1321 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1028 1040 IPR008271 GO:0004672|GO:0006468
Amo05g4288 1321 PANTHER SERINE/THREONINE-PROTEIN KINASE 24 1320 - -
Amo05g4288 1321 ProSiteProfiles AGC-kinase C-terminal domain profile. 1199 1303 IPR000961 GO:0004674|GO:0005524|GO:0006468
Amo05g4288 1321 SUPERFAMILY Protein kinase-like (PK-like) 906 1234 IPR011009 -
Amo05g4288 1321 MobiDBLite consensus disorder prediction 475 510 - -
Amo05g4288 1321 MobiDBLite consensus disorder prediction 206 256 - -
Amo05g4288 1321 MobiDBLite consensus disorder prediction 1066 1096 - -
Amo05g4288 1321 PANTHER SERINE/THREONINE PROTEIN KINASE IREH1-RELATED 24 1320 - -
Amo05g4288 1321 MobiDBLite consensus disorder prediction 12 29 - -
Amo05g4288 1321 MobiDBLite consensus disorder prediction 111 138 - -
Amo05g4288 1321 MobiDBLite consensus disorder prediction 740 760 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4288 Amo-Chr5 112614913 112625189 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4288 1 1319 AGC Kinase Gene Family AT3G17850 66.716 0.0 1640
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Amo05g4288 Pkinase 1.7e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4288 - - gmx:100776995 1964.89