Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4276 ATGGCCCTCGATACTGCCCGAGGAATAAACCATTTGCACAACTGCACTCCAGTGATTGTACACCGTGATTTGAAGTCACTAAATCTTCTTGTTGATAAAAATTGGGTTGTGAAGTTATGTGATTTTGGCTTATMAAGAATGAAGCACATTACATTCCTTTCTTCCAGATTAACTGCAGGAACAGTGCGATGTTTATACTTGGGAGTCATGTTATGGGAGCTCTCTACTTTGCAACAGCCCTGGGGTGGAATGAATCGGATGCAAGTTGTGGGTGCTGTCGGTTTCCAGCATTATTGCCTTGTCATTACAGATGATATGGACCCTGCTGTCACGGATATTATCAAGCAATGCTGCAGACGTGAGTGTACTCTTCAATCATTTTATCCGTATTCTAAGATATCAGAACTCTTGCTTATAGCATTCTGA 426 0.4155 MALDTARGINHLHNCTPVIVHRDLKSLNLLVDKNWVVKLCDFGLXRMKHITFLSSRLTAGTVRCLYLGVMLWELSTLQQPWGGMNRMQVVGAVGFQHYCLVITDDMDPAVTDIIKQCCRRECTLQSFYPYSKISELLLIAF* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4276 141 SUPERFAMILY Protein kinase-like (PK-like) 1 121 IPR011009 -
Amo05g4276 141 PANTHER SERINE-THREONINE PROTEIN KINASE 1 124 - -
Amo05g4276 141 PANTHER PUTATIVE, EXPRESSED-RELATED 1 124 - -
Amo05g4276 141 ProSiteProfiles Protein kinase domain profile. 1 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4276 141 ProSitePatterns Serine/Threonine protein kinases active-site signature. 19 31 IPR008271 GO:0004672|GO:0006468
Amo05g4276 141 Pfam Protein kinase domain 2 46 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4276 141 Gene3D Transferase(Phosphotransferase) domain 1 67 125 - -
Amo05g4276 141 Gene3D Transferase(Phosphotransferase) domain 1 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4276 Amo-Chr5 112360405 112362476 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4276 1 125 MAP Kinase Kinase Kinase AT1G73660 60.563 1.20e-51 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Amo05g4276 Pkinase 3e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4276 - - gmx:100816332 186.422