Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4262 ATGTGGATGGTGGGTTACAATGAAGGTGGAGGTGGCGATCATCATCACCATCAGTTAAACATGGTTGTTGATCACCATCATCATCATCACCATCATCATCCATTCGGAGCTTCTGGAAGAAAGCTAAGGCCTCTCATGCCAAGACCAATGACTTCTCCTAACAACTCAACAACAACGACAACAACAACAACAACCAATAACAACAACAACAACAACCCATGCTTAAGCCTTGTTCATCATCAGGGCAACGATTTCTTCTCTCAATATCACAACCATTTATGTAAGAAACTAAAAGTGTTGTTATTGGGAGAGCAGAACAAGAGGGAAAATGGTAACAACAACAATAATGGTTCGGCACCGGTTGTGGTGAGTTCCCGGTGGAATCCAACGCCGGAGCAGCTGAGAGCGCTTGAGGAGCTGTACAGAAGAGGGACTCGGACGCCGTCGGCGGAGCAAATCCAACACATAACAGCGCAGCTGAGAAGGTTTGGGAAGATTGAGGGCAAGAATGTCTTTTACTGGTTTCAGAATCATAAGGCTAGGGAGAGGCAAAAGCGTCGCCGCCAGATGGAATCATCTGATACCAATAACAATAATCATCCACTTCAAAACAACAATCACCACCGTGATTTTGATTCTTCTTCTGAAAAGAAAGAACTGGCAGCAAGTAGGACAATGGTTGAAGTTGAACAGACCAAAAACTGGGCATCCTCTACAAACTGCACTACTCTTGCAGAGGAATCTGTTTCAATGGAAAGAGAGGGAGGAGCAGGAAAAGCAGGAGTGGCAGAGTGTAGAGCAGATGGATGGGTCCAATTCGAAGAAGGGGAATTACAACAAAGAAGGAACTTTATGGAAAGGAATGCCACGTGGCACATGATGATGCATCATCACTCCCCATGTGCTGCTGCTGCACCACCTGCACCTGCACCACCTCTCATTAATAATAATAATAATAATAATCTCAGCTTCTTTATTTCATCAGAAAACAATTACAACAACACCACTCTTCTCCACTTAACCACCACTCATAGCAATGAAGAAGATGATGATGTTCTTGTTGATAATAGTATTATTAACATTCATCAGAATGAGAATCAAACCCTTCAACTTTTCCCTCTAAGGAGCGGTGACGATCTTCATCATCACATTAACGGCAAAGGGACAGAGATATCAGCATCAAATGATGCCATCACCCCAAACCACCATCACTTCTTTGAGTTCCTTCCTTTGAAGAACAACTAA 1245 0.4337 MWMVGYNEGGGGDHHHHQLNMVVDHHHHHHHHHPFGASGRKLRPLMPRPMTSPNNSTTTTTTTTTNNNNNNNPCLSLVHHQGNDFFSQYHNHLCKKLKVLLLGEQNKRENGNNNNNGSAPVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQHITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESSDTNNNNHPLQNNNHHRDFDSSSEKKELAASRTMVEVEQTKNWASSTNCTTLAEESVSMEREGGAGKAGVAECRADGWVQFEEGELQQRRNFMERNATWHMMMHHHSPCAAAAPPAPAPPLINNNNNNNLSFFISSENNYNNTTLLHLTTTHSNEEDDDVLVDNSIINIHQNENQTLQLFPLRSGDDLHHHINGKGTEISASNDAITPNHHHFFEFLPLKNN* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4262 414 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 65 413 - -
Amo05g4262 414 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 65 413 IPR044555 GO:0003700|GO:0099402
Amo05g4262 414 MobiDBLite consensus disorder prediction 180 231 - -
Amo05g4262 414 Gene3D - 123 185 - -
Amo05g4262 414 MobiDBLite consensus disorder prediction 49 69 - -
Amo05g4262 414 SMART HOX_1 122 189 IPR001356 GO:0003677
Amo05g4262 414 Pfam Homeodomain 125 184 IPR001356 GO:0003677
Amo05g4262 414 ProSiteProfiles 'Homeobox' domain profile. 130 185 IPR001356 GO:0003677
Amo05g4262 414 CDD homeodomain 126 186 IPR001356 GO:0003677
Amo05g4262 414 MobiDBLite consensus disorder prediction 205 224 - -
Amo05g4262 414 MobiDBLite consensus disorder prediction 25 69 - -
Amo05g4262 414 SUPERFAMILY Homeodomain-like 125 190 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4262 Amo-Chr5 112022628 112025260 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4262 1 413 Wox Gene Family AT3G18010 34.174 1.67e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Amo05g4262 Homeodomain 1.5e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4262 - - adu:107490490 645.195