Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4251 ATGGGGGAAACAAATGCACGGTCAAATTCGCATAAGCATTGGCGTTTTGGTACGAATTCGCAGCAGAATATTCARTTGCGTTCACGGTCGAGTTCGAATTCGAWATCTTCGTCACCGGARTCACCACCAAAGTCTCTGATGGAGAACCTTATGGGACTTCTTAGGGTTCGAATCAAGCGTGGCGTCAACCTCGCCGTTCGTGATGTTCGTAGTAGCGATCCCTATGTTGTCATCAAGATGGGTAAACAGAAACTCAAGACTCGTGTGATTAAAAGGGATGTTAATCCTGAGTGGAATGAGGACCTCACGCTTTCGGTTGTAGATCCGCATGCTTCAGTCTCACTGACTATATATGACCACGATACATTTAGCAAAGATGACAAAATGGGAGATGCAGAGTTTGAAATCTTACCATTTATAGAAGCCTTGAAGATGAATGTGACAGGCCTGCCAAATGGTACTGTGGTCAAAAGAATACAACAAAGCCGGGATAACTATCTCGCAGATGAGAGCCGCATCACTTATATCAACGGTAAGCTTGTTCAAGATATGATCCTTAGACTGCGAAACGTGGAATGTGGTGAACTGGAAATCCAGCTAAATTGGATTGATCTTCCTGGGTCCAAGGGTTTATGA 636 0.4403 MGETNARSNSHKHWRFGTNSQQNIQLRSRSSSNSXSSSPESPPKSLMENLMGLLRVRIKRGVNLAVRDVRSSDPYVVIKMGKQKLKTRVIKRDVNPEWNEDLTLSVVDPHASVSLTIYDHDTFSKDDKMGDAEFEILPFIEALKMNVTGLPNGTVVKRIQQSRDNYLADESRITYINGKLVQDMILRLRNVECGELEIQLNWIDLPGSKGL* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4251 211 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 42 210 IPR044562 -
Amo05g4251 211 PANTHER CALCIUM-DEPENDENT ARF-TYPE GTPASE ACTIVATING FAMILY PROTEIN 42 210 - -
Amo05g4251 211 SMART C2_3c 53 148 IPR000008 -
Amo05g4251 211 MobiDBLite consensus disorder prediction 1 46 - -
Amo05g4251 211 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 48 143 IPR035892 -
Amo05g4251 211 Pfam C2 domain 52 136 IPR000008 -
Amo05g4251 211 Gene3D C2 domain 47 209 IPR035892 -
Amo05g4251 211 ProSiteProfiles C2 domain profile. 38 152 IPR000008 -
Amo05g4251 211 CDD C2_ArfGAP 52 194 - -
Amo05g4251 211 MobiDBLite consensus disorder prediction 11 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4251 Amo-Chr5 111694873 111697454 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4251 84 211 C2H2 Transcription Factor Family AT1G70790 56.923 1.95e-49 156