Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4225 ATGGCCGCATTGTTGGCTACGTCCTTGCCAAGTTGGAGGAGGAGACTTCTGAGTGCCATGGCCACATCACCTCCCTCTCCGTCCTCAGCACCCACCGCAAAGCTTGGCCTTGCCACCAAGCTCATGAAAGCTGCTCAGAATGCCATGGAACAGGCAAGTGTTGAGTACGTCTCCCTGCATGTTAGAAAGAGCAATCGTGCTGCATTTAATTTGTACGCGGAGACATTGGGTTATAAGATTCATGATATGGAGGCGAAGTATTATGTAGATGGGGAGAATGCTTATGACATGAGGAAGCAACTCAAGGGGAAGCAGACGCATCAGCATCATCACAGTGGGGGTCATCACCACCACCACCACCACCATCATCGTCATGAGCATGGTGGTGGTTGTTGTTCCAGTGAAGCAAAGGCAGAGACGAGAAATGCGAAGCGCCCCTGA 441 0.5147 MAALLATSLPSWRRRLLSAMATSPPSPSSAPTAKLGLATKLMKAAQNAMEQASVEYVSLHVRKSNRAAFNLYAETLGYKIHDMEAKYYVDGENAYDMRKQLKGKQTHQHHHSGGHHHHHHHHHRHEHGGGCCSSEAKAETRNAKRP* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4225 146 MobiDBLite consensus disorder prediction 101 146 - -
Amo05g4225 146 Pfam Acetyltransferase (GNAT) family 34 78 IPR000182 GO:0016407
Amo05g4225 146 MobiDBLite consensus disorder prediction 103 127 - -
Amo05g4225 146 Gene3D - 32 142 - -
Amo05g4225 146 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 34 102 IPR000182 GO:0016407
Amo05g4225 146 PANTHER ACYL-COA N-ACYLTRANSFERASE-RELATED 33 139 - -
Amo05g4225 146 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 35 104 IPR016181 -
Amo05g4225 146 MobiDBLite consensus disorder prediction 128 146 - -
Amo05g4225 146 PANTHER N-TERMINAL ACETYLTRANSFERASE 33 139 IPR045047 GO:0004596|GO:0006474|GO:0031415
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4225 Amo-Chr5 111337727 111339699 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Amo05g4225 Acetyltransf_1 0.00015 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4225 K20791 - gmx:100810038 145.976