Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4210 ATGAAGAATATTCTGAAGAAGCTTCATATCATGAATGAACAAGGTTCCTCTTCTTCTTCATCATCTAAAGGCAACAGCAACAACAAGAAGTCCAGTGGTGGAACATCTTCATCCTCTAAGAATAATAAGCTTTTAGAATCTCGGTCCCCTCAAAGTTCTGAGCATAAACCCTTCTCTGGCCTCTCCAATTGGTTGCATTCTGTTGCTAATAGGCAGAGTCCTAGTCCTCCATCTTCAAACCAAGCAGGAGGGGAGAGAATGGAGCAATCTGATACAGCGAGTAGTGCCGGTTTAGAGGTTGTTTCGGCCTCAGCTGGGCGCGATTCGGAGTCTAGTAACTCCAGGGATCCAGAAGTGGAGGAGGAGTATCAGATACAATTGGCTCTGGAGCTAAGTGCAAAGGAGGATCCTGAGGCTGTGCAGATTGAAGCTGTTAAGCAGATCAGTTTAGGGTCTTGTGATCCTGATAATACGCCGGCTGAAGTCGTGGCCTACCGATACTGGAATTACAATGCTCTTGGTTATGATGACAAGATCTTGGATGGTTTCTATGATCTCTATGGGATTTTAACCGAGTCAACCTCTTATAGAATGCCTTCGCTTGTCGATCTGCAAGGAACACTGGCCTCAGGTAGTGTCACATGGGAAGCTGTCTTGGTCAACAGGGCTGCTGATTCTAATTTGTTGAAACTCGAGGAAAGAGCCCTGGAGCTGACAATCACGCCAACGGGACCCAGCATGGAAGTAGTTATAGATAGCAATTTAGTGGGCAAGCTTGCGGTGTTAGTGGCTGATTATATGGGTGGTCCAGTTGGAGATCCAGAAAGCATGACAAGAGCATGGAAGAGTCTTAGTTATAGTCTGAAAGCAACCCTTGGCAGTATGGTTTTGCCACTCGGTTCTCTAACGATTGGATTGGCTAGGCATCGTGCATTGTTATTTAAGGTTCTAGCGGATGGTTTGGGAATCCCATGCCGGTTGGTGAAAGGACAGCAGTATACCGGCTCTGACGATGTAGCAATAAATTTTGTCAAGATTGATGATGGAAGGGAGTACATTGTTGACCTGATGGCAGATCCCGGGACACTTATTCCATCCGATGCAACTGGATCACACATTGAATATGTTGAATCTTCTTTTGTGGCAACTCCTTCATCAAGAAACCTTGATTCCTCTCATGTAGCATCATTGAACAGTGGTGTTGAAAGTTCATCTGAGGAAACATCAGAGTTCGGCATGTTGGACAAAGGGAACAATATATCTAAACATTTTTTGCATTCAGGGAAAGAATCTGGTATGAGCAGACTTGCTACGAGGACTGAAGATTCAGTAGGACCCTTGAGTGAATCAACTAGTCCCCATAATGTTGAGAAGATCACCGGGCGGGAAGCTCCAAATAGACCGAATCAACGATATGCACATGCAAGATCTCCTTCTTGGACTGAAGGGATTAGTTCCCCTGCCGTGCGCAGAATGAAAGTCAAAGATGTTTCATTATATATGATTGATGCTGCCAAGGAAAATCCTCACTTAGCTCAAAAACTACATGATGTTTTACTTGAAAGTGGTGTCATTGCTCCTCCAAATTTATTTTCTGAAATTTATCACGAGTTAGGCTCCCCAACTGAAGAAAAAGATGAACACAAACCAGAAAGTGGACAACAAGAGACTCAGGTTGATGAAAGTCTCGGTCCTACTTTGCCTCACCACAGAGTTCATCCGAAAGGAAGTTCAAGCATCCAGCCGGAGCACTCTAAGCCTGTAGAAGGTTTAGGAATAAACCTTCCTCTTGATCCGAAGTTAGCAGCTGTACAACATACACCATCCCAGGTAACATATGGGAAAAATGTTCCAGTTGCGGCGGCTGCAGCAGCAGCAGCTGCTGTTGTTGCTTCCTCTATGGTAGCTGCTGTAGCAAAGTCAAACACTGACTCGACCATTGATCTTCCAGTAGCTGCAGCAGCCACTGCAACTGCTGCAGCTGTAGTAGCAACCACTGCAGCTGTCAGCAAACAGTATGAGCAAGGCAGTCGAAGTGACGGGGACATGGATGGCACTGGTTATGAGCCAAAGGGTAGTGGTGATGGTGAGAATATTGTGGTAGGAGCAAATTCAGAAGGTGACAGAATATCTGATAGATCTATAGTAAGCAATGACAGTACAAAATCTGATTTTACATTAGATGATGTTGCCGAGTATGACATTCCGTGGGAGGAAATCACACTGGGTGAACGTATCGGACTTGGATCGTATGGAGAGGTATACCGTGGTGAATGGCGTGGAACAGAAGTTGCTGTAAAAAGATTTCTTGATCAAGATATATCTGGTGAATCACTTGAAGAATTCAAAAGTGAGGTTCAAATAATGAAAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGAGCAGTTACTCGACCTCCGAATCTTTCTATTGTTACCGAATTTCTTCCCAGAGGAAGTTTGTACAGACTAATTCATCGACCAAACAATCAATTAGATGAGCGAAGGCGGTTGAGGATGGCCCTCGATACCGCCCGAGGAATGAACTATTTGCACAACTGCACTCCAGTGATTGTACACCGTGATTTGAAGTCACCAAATCTTCTTGTTGATAAAAATTGGGTTGTGAAGGTATGTGATTTTGGCTTATCAAGAATGAAGCACAGTACATTCCTTTCTTCCAGATCAACTGCAGGAACAGCCGAGTGGATGGCGCCTGAAGTGTTAAGAAATGAACCTTCAAATGAAAAGTGCGATGTTTATAGCTTTGGAGTCATATTATGGGAGCTCTCTACTTTGCAACAGCCCTGGGGTGGAATGAATCCGATGCAAGTTGTGGGTGCTGTTGGTTTCCAGCATCGTCGCCTTGACATTCCAGATGATATGGACCCTGCCATCGCGGATATTATCAAGCAATGCTGGCAGACAGATCCAAAGTTGAGACCTACATTCGCTGAAATAATGGCAGCGCTGAAGCCGTTGCAGAAGCCTATCATTGGTTCTCAATCTCAAGTGCCAAAACCGGGTAGGCATGAGAAGGCTCAGTCATCAAGAGTTGGTGCAGACTCAGCAGGATAG 3081 0.4486 MKNILKKLHIMNEQGSSSSSSSKGNSNNKKSSGGTSSSSKNNKLLESRSPQSSEHKPFSGLSNWLHSVANRQSPSPPSSNQAGGERMEQSDTASSAGLEVVSASAGRDSESSNSRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKILDGFYDLYGILTESTSYRMPSLVDLQGTLASGSVTWEAVLVNRAADSNLLKLEERALELTITPTGPSMEVVIDSNLVGKLAVLVADYMGGPVGDPESMTRAWKSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADGLGIPCRLVKGQQYTGSDDVAINFVKIDDGREYIVDLMADPGTLIPSDATGSHIEYVESSFVATPSSRNLDSSHVASLNSGVESSSEETSEFGMLDKGNNISKHFLHSGKESGMSRLATRTEDSVGPLSESTSPHNVEKITGREAPNRPNQRYAHARSPSWTEGISSPAVRRMKVKDVSLYMIDAAKENPHLAQKLHDVLLESGVIAPPNLFSEIYHELGSPTEEKDEHKPESGQQETQVDESLGPTLPHHRVHPKGSSSIQPEHSKPVEGLGINLPLDPKLAAVQHTPSQVTYGKNVPVAAAAAAAAAVVASSMVAAVAKSNTDSTIDLPVAAAATATAAAVVATTAAVSKQYEQGSRSDGDMDGTGYEPKGSGDGENIVVGANSEGDRISDRSIVSNDSTKSDFTLDDVAEYDIPWEEITLGERIGLGSYGEVYRGEWRGTEVAVKRFLDQDISGESLEEFKSEVQIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDTARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNEPSNEKCDVYSFGVILWELSTLQQPWGGMNPMQVVGAVGFQHRRLDIPDDMDPAIADIIKQCWQTDPKLRPTFAEIMAALKPLQKPIIGSQSQVPKPGRHEKAQSSRVGADSAG* 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4210 1026 Pfam Ethylene-responsive protein kinase Le-CTR1 160 364 - -
Amo05g4210 1026 MobiDBLite consensus disorder prediction 671 704 - -
Amo05g4210 1026 MobiDBLite consensus disorder prediction 1000 1026 - -
Amo05g4210 1026 MobiDBLite consensus disorder prediction 393 415 - -
Amo05g4210 1026 Gene3D Phosphorylase Kinase; domain 1 733 817 - -
Amo05g4210 1026 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 1023 - -
Amo05g4210 1026 MobiDBLite consensus disorder prediction 539 593 - -
Amo05g4210 1026 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 1023 - -
Amo05g4210 1026 MobiDBLite consensus disorder prediction 433 457 - -
Amo05g4210 1026 PRINTS Tyrosine kinase catalytic domain signature 814 827 IPR001245 GO:0004672|GO:0006468
Amo05g4210 1026 PRINTS Tyrosine kinase catalytic domain signature 853 871 IPR001245 GO:0004672|GO:0006468
Amo05g4210 1026 PRINTS Tyrosine kinase catalytic domain signature 900 910 IPR001245 GO:0004672|GO:0006468
Amo05g4210 1026 PRINTS Tyrosine kinase catalytic domain signature 919 941 IPR001245 GO:0004672|GO:0006468
Amo05g4210 1026 PRINTS Tyrosine kinase catalytic domain signature 963 985 IPR001245 GO:0004672|GO:0006468
Amo05g4210 1026 MobiDBLite consensus disorder prediction 539 555 - -
Amo05g4210 1026 MobiDBLite consensus disorder prediction 10 110 - -
Amo05g4210 1026 SUPERFAMILY Protein kinase-like (PK-like) 720 991 IPR011009 -
Amo05g4210 1026 MobiDBLite consensus disorder prediction 1 121 - -
Amo05g4210 1026 Gene3D Transferase(Phosphotransferase) domain 1 819 1002 - -
Amo05g4210 1026 CDD STKc_MAP3K-like 746 992 - -
Amo05g4210 1026 Pfam Protein tyrosine and serine/threonine kinase 740 992 IPR001245 GO:0004672|GO:0006468
Amo05g4210 1026 ProSiteProfiles Protein kinase domain profile. 740 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4210 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 859 871 IPR008271 GO:0004672|GO:0006468
Amo05g4210 1026 SMART serkin_6 740 1000 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4210 1026 ProSitePatterns Protein kinases ATP-binding region signature. 746 767 IPR017441 GO:0005524
Amo05g4210 1026 MobiDBLite consensus disorder prediction 393 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4210 Amo-Chr5 111133441 111141389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4210 1 1009 MAP Kinase Kinase Kinase AT1G73660 62.451 0.0 1150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Amo05g4210 PK_Tyr_Ser-Thr 2.7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4210 - - gmx:100816332 1494.56