Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4205 ATGGATCGTAACAAAAAGGGTGCACCGGAAGATAAGTTTTTTACCGAGTACGGAGAGGCAAGCCGATATGAGATCCAAGAAGTTGTTGGAAAAGGAAGCTATGGTATTGTGGGTGCTGCCATTGACACTCATACTGGGGAAAAAGTTGCAATCAAGAAAATTAATGATGTTTTTGAGCATGTATCGGATGCCACACGAATCCTAAGAGAAATAAAGCTACTTCGGTTGCTTCGACATCCTGATATAGTAGAAATTAGGCATATAATGCTTCCTCCTTCTCGGAGAGAGTTCAAGGATGTATATGTTGTATTTGAGTTGATGGAGTCTGACCTTCATCAAGTCATTAAAGCAAATGATGACCTTTCGCCTGAACACTACCAGTTTTTCTTGTACCAACTTCTTCGGGGTCTAAAATACATACATTCAGCTAATGTCTTTCATCGCGACTTAAAGCCGAAAAATATTCTTGCTAATGCTGATTGTAAACTTAAGATATGCGATTTTGGGCTTGCTCGAGTATCATTCAATGAAGCCCCGTCAGCTATTTTCTGGACTGAAGATGCAATTCATTATTTCTATTATAGAGATCATCACTCTAGACCTCTTGCTGACTCACTTTACCTACTTCTTACTAAGGACTACGTTGCAACTCGATGGTATCGTGCACCTGAACTATGCGGTTCTTTTTTCTCAAAATATACCCCCGCTATTGATATTTGGAGCATTGGATGCATATTTGCAGAAATGCTCACTGGGAGGCCATTGTTTCCTGGGAAAAATGTGGTGCATCAATTGGATCTCATGACCGATTTGCTTGGTACTCCTCCTGCCGAATCCATTTCCAGGATTCGAAATGAGAAGGCTAGAAGGTATCTTAGTAGCATGCGGAAAAAACAACCAGTTCCCTTCACCAAAAAATTTCCAAATGCAGATGTGCTGGCTCTTCGTTTGCTGGAACGGCTACTTGCATTTGATCCTAAAGATCGTCCAACAGCTGAAGAGGCATTAGCTGATCCTTACTTCAATGGTTTGGCAAGTGTAGATCGCGAACCATCCACTCAGCCCATTTCAAAGCTTGAGTTTGAGTTTGAGAGAAGGAAATTGACCAAAGATGATGTCAGAGAGTTGATTTATCGAGAGATTCTAGAGTATCATCCACAGATGCTCCAAGAATATCTTCGTGGTGGAGAGCAAACAAGTGGTTTCATGTATCCAAGCGGAGTTGATCGGTTTAAGCGACAATTTGCGCATCTTGAGGAACTTCAAGGCAAAGGTGAACGAAGCACCCCGTTGCAGAGACAGAATGTCTCCTTACCTAGAGAGCGAGTTGCTGCTTCCAACGATGAAACTGACAAGGATGGTGAACAACAGAGTCCTTCAGATACGCCAGGTTCACGGAGCTTATTGAAAAGTGCTAGCATTACTTCCAAGTCTTATGTCAAAGCAAATAGAGATCCAGAGGAGCCAATTATGGAAGCCAATGATGAGGTGGCTGAGATGACGGAGAAAATTGCTGTCCTCCATGCTTAG 1530 0.4235 MDRNKKGAPEDKFFTEYGEASRYEIQEVVGKGSYGIVGAAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIRHIMLPPSRREFKDVYVVFELMESDLHQVIKANDDLSPEHYQFFLYQLLRGLKYIHSANVFHRDLKPKNILANADCKLKICDFGLARVSFNEAPSAIFWTEDAIHYFYYRDHHSRPLADSLYLLLTKDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGRPLFPGKNVVHQLDLMTDLLGTPPAESISRIRNEKARRYLSSMRKKQPVPFTKKFPNADVLALRLLERLLAFDPKDRPTAEEALADPYFNGLASVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRGGEQTSGFMYPSGVDRFKRQFAHLEELQGKGERSTPLQRQNVSLPRERVAASNDETDKDGEQQSPSDTPGSRSLLKSASITSKSYVKANRDPEEPIMEANDEVAEMTEKIAVLHA* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4205 509 Coils Coil 490 509 - -
Amo05g4205 509 SUPERFAMILY Protein kinase-like (PK-like) 17 345 IPR011009 -
Amo05g4205 509 Pfam Protein kinase domain 23 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4205 509 CDD STKc_TDY_MAPK 22 386 - -
Amo05g4205 509 SMART serkin_6 23 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4205 509 Gene3D Transferase(Phosphotransferase) domain 1 109 364 - -
Amo05g4205 509 ProSiteProfiles Protein kinase domain profile. 23 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4205 509 MobiDBLite consensus disorder prediction 457 480 - -
Amo05g4205 509 MobiDBLite consensus disorder prediction 427 441 - -
Amo05g4205 509 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 189 - -
Amo05g4205 509 ProSitePatterns Protein kinases ATP-binding region signature. 29 53 IPR017441 GO:0005524
Amo05g4205 509 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 8 189 - -
Amo05g4205 509 Gene3D Phosphorylase Kinase; domain 1 39 387 - -
Amo05g4205 509 MobiDBLite consensus disorder prediction 422 496 - -
Amo05g4205 509 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 204 473 - -
Amo05g4205 509 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 204 473 - -
Amo05g4205 509 ProSitePatterns MAP kinase signature. 58 161 IPR003527 GO:0004707|GO:0005524|GO:0006468
Amo05g4205 509 MobiDBLite consensus disorder prediction 481 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4205 Amo-Chr5 111044151 111049092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4205 5 508 MAP Kinase Gene Family AT1G73670 71.482 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Amo05g4205 Pkinase 2.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4205 - - gmx:100780831 788.489