Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo05g4195 | ATGCATATCGAGGAGGACATTCGTTCTTTACAGCTTGATTCTGRGGAAGAGACTAATGGATCAGTAACGCCAGAGGATGTGAAGCCAGAAGAAGTTGATAAATCTGAACATATGGATGAAGATCCAAAACCAGAAGTTCAAGCAGAACCTATCGATGTTGAACCAAAAGCAAAAGAGAAGGAAATTCCTCCTACACAGGACGAAGATGATGAGGCGGAGATGATGAAAAAAAGGCACTTAAATGTTGTGTTTATTGGTCATGTAGATGCTGGTAAGTCTACAACAGGAGGTCAGATATTGTTTCTAAGTGGCCAGGTTGATGAAAGAACTATCCAAAAATATGAGAAAGAAGCTAAAGACAAAATTGAAGTTGGAAGAGCACATTTTGAAACAGAGACAACAAGGTTTACAATTTTGGATGCACCTGGTCACAAAAGTTATGTACCTAACATGATCAGTGGTGCATCTCAGGCTGATATTGGAGTGTTGGTAATTTCAGCTCGAAAGGGAGAATTTGAAACAGGATACGAGAGAGGTGGACAAACTCGTGAACATGTCCAGCTCGCAAAAACGCTGGGGGTGGCTAAATTGCTTGTTGTTGTCAATAAAATGGATGAGCCGACTGTGGAATGGTATGATGAAATTGAGTCCAAAATGACACCATTTCTAAGACAATCAGGATACAATGTGAAAAAAGGTTGGACATGGTTTGACATGTTAGATACGTTCAGGATGATGTTAAAGTTGGAAGTGGAAGGCCATTTCTTTGGAGTAGATGTCATTTTTCTACCAATATCTGGGTTGGTCGGTACAAATATGAAGACAAGAGTGGATAAAAAAATCTGCCCATGGTGGAATGGCCCATGCTTATTTGAAGCACTTGACGCTGTTGAAGTTCCTGAGCGAGACCCCAAAGGCCCCTTTAGGATGCCTATAATTGACAAATTCAAAGACATGGGAACTGTTGTTATGGGAAAAGTGGAATCTGGTACCGTTCGTGAGGGAGATTCCTTGTTGGTTATGCCAAATAAGGCTCAAGTAAAAGTTGTTGCTATATTTATTGATGAGGATAAGGTAAAACGTGCTGGACCTGGTGAAAATTTAAGGATTAGATTATCTGGTGTTGAAGAAGACGACATATCAAGTGGGTTTGTCCTATCAAGTGTTGCAAATTCAATACCAGCTGTTACTGAGTTTGTTGCTCAATTGGCAATCCTTGAATTGCTGGACAATGCTATTTTTACTGCGGGGTATAAGGCTGTTTTGCATATCCACTCTGTTGTTGAAGAATGTGAGATTATTGAGCTCTTACATCAAATTGATCCAAAAACAAGGAAGCCTATGAAAAAAAAGGTCCTCTTCGTGAAGAACGGGGCTAATGTTGTGTGCCGAATTCAGGTTAATAGCATGATATGCATTGAGAAGTTCTCTGATTTTCCACAGCTTGGGAGATTTACTCTTCGCAGTGAAGGGAAAACTGTTGCAGTGGGGAAGGTTACTGCTCTGTAA | 1509 | 0.4036 | MHIEEDIRSLQLDSXEETNGSVTPEDVKPEEVDKSEHMDEDPKPEVQAEPIDVEPKAKEKEIPPTQDEDDEAEMMKKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKIEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVAKLLVVVNKMDEPTVEWYDEIESKMTPFLRQSGYNVKKGWTWFDMLDTFRMMLKLEVEGHFFGVDVIFLPISGLVGTNMKTRVDKKICPWWNGPCLFEALDAVEVPERDPKGPFRMPIIDKFKDMGTVVMGKVESGTVREGDSLLVMPNKAQVKVVAIFIDEDKVKRAGPGENLRIRLSGVEEDDISSGFVLSSVANSIPAVTEFVAQLAILELLDNAIFTAGYKAVLHIHSVVEECEIIELLHQIDPKTRKPMKKKVLFVKNGANVVCRIQVNSMICIEKFSDFPQLGRFTLRSEGKTVAVGKVTAL* | 503 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo05g4195 | 502 | CDD | eRF3_C_III | 394 | 502 | - | - | |
Amo05g4195 | 502 | Pfam | Elongation factor Tu domain 2 | 320 | 386 | IPR004161 | GO:0005525 | |
Amo05g4195 | 502 | PANTHER | TRANSLATION FACTOR | 258 | 496 | - | - | |
Amo05g4195 | 502 | PANTHER | TRANSLATION FACTOR | 122 | 232 | - | - | |
Amo05g4195 | 502 | Gene3D | - | 60 | 301 | IPR027417 | - | |
Amo05g4195 | 502 | SUPERFAMILY | Translation proteins | 299 | 391 | IPR009000 | - | |
Amo05g4195 | 502 | MobiDBLite | consensus disorder prediction | 23 | 75 | - | - | |
Amo05g4195 | 502 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 77 | 305 | IPR000795 | GO:0003924|GO:0005525 | |
Amo05g4195 | 502 | PANTHER | TRANSLATION FACTOR | 2 | 121 | - | - | |
Amo05g4195 | 502 | MobiDBLite | consensus disorder prediction | 1 | 75 | - | - | |
Amo05g4195 | 502 | PRINTS | GTP-binding elongation factor signature | 153 | 164 | IPR000795 | GO:0003924|GO:0005525 | |
Amo05g4195 | 502 | PRINTS | GTP-binding elongation factor signature | 197 | 206 | IPR000795 | GO:0003924|GO:0005525 | |
Amo05g4195 | 502 | PRINTS | GTP-binding elongation factor signature | 81 | 94 | IPR000795 | GO:0003924|GO:0005525 | |
Amo05g4195 | 502 | PRINTS | GTP-binding elongation factor signature | 137 | 147 | IPR000795 | GO:0003924|GO:0005525 | |
Amo05g4195 | 502 | CDD | eRF3_II | 307 | 388 | - | - | |
Amo05g4195 | 502 | CDD | EF1_alpha | 81 | 301 | - | - | |
Amo05g4195 | 502 | Pfam | Elongation factor Tu C-terminal domain | 393 | 501 | IPR004160 | - | |
Amo05g4195 | 502 | Pfam | Elongation factor Tu GTP binding domain | 77 | 280 | IPR000795 | GO:0003924|GO:0005525 | |
Amo05g4195 | 502 | PANTHER | BNAA06G12300D PROTEIN | 258 | 496 | - | - | |
Amo05g4195 | 502 | PANTHER | BNAA06G12300D PROTEIN | 122 | 232 | - | - | |
Amo05g4195 | 502 | PANTHER | BNAA06G12300D PROTEIN | 2 | 121 | - | - | |
Amo05g4195 | 502 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 72 | 311 | IPR027417 | - | |
Amo05g4195 | 502 | Gene3D | Translation factors | 395 | 502 | - | - | |
Amo05g4195 | 502 | Gene3D | Translation factors | 305 | 390 | - | - | |
Amo05g4195 | 502 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 397 | 501 | IPR009001 | - | |
Amo05g4195 | 502 | TIGRFAM | small_GTP: small GTP-binding protein domain | 80 | 213 | IPR005225 | GO:0005525 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo05g4195 | Amo-Chr5 | 110839147 | 110845080 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo05g4195 | 77 | 502 | Eukaryotic Initiation Factors Gene Family | AT5G60390 | 33.698 | 4.37e-77 | 247 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo05g4195 | K03267 | - | gmx:100793653 | 804.283 |