Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4193 ATGGGAGAAGTGAAGCTGATTGGCACACACCAAAGCTTCCCATGTGCAAGAATAGAATGGGGTCTGAAGATAAAGGGCGTAGAATATGAGTACTTAAAAGAGGATCTGTCTAATAAGAGTGATTTGCTTATTGAGTCAAATCCTGTTCACAAGAAAGTCCCTGTTCTTATTCACAAGGGAAAGCCAATTGCTGAATCACTTGTCATTCTTGAGTACATAGATGAAACATGGAAGGACAACAACAGCCACTCTTTGCTACCACAGGACCCTTATGAGAGAGCACTCGCACGCTTCTGGGCTAAGTTTATTGATGAAAAGTGTGTGATAAGTGTATGGGGAGCATGTGTGGCCCAAGAAGGAGAAGAGAAAGAGAAAGCTGTAGAAGGTGCCATTGAGACACTTTCACATCTTGAGAAGCAAATCAAAGGGAAGAAGTTCTTTGGTGGAGAGAAGATAGGGTACCTTGATATTGTAGCTGGTTGGTTATCCTATTGGCTAAGTGTTCTTGAAGAGCTTGGAGAGATTGAACTTGTTAATGCTGAGAGGTTCCCATGTCTTCATGAATGGGGAAAGAATTTCATTAACACTTCACCTATCAAAGATTGCATTCCACCCAGAGAAGATGTGCTTGCTTATTTCAGCTTTGGCATCAATTATGTGCGTTCCATGGCACCCAATAAAGCATGA 687 0.4192 MGEVKLIGTHQSFPCARIEWGLKIKGVEYEYLKEDLSNKSDLLIESNPVHKKVPVLIHKGKPIAESLVILEYIDETWKDNNSHSLLPQDPYERALARFWAKFIDEKCVISVWGACVAQEGEEKEKAVEGAIETLSHLEKQIKGKKFFGGEKIGYLDIVAGWLSYWLSVLEELGEIELVNAERFPCLHEWGKNFINTSPIKDCIPPREDVLAYFSFGINYVRSMAPNKA* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4193 228 CDD GST_N_Tau 4 77 - -
Amo05g4193 228 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 225 IPR045073 -
Amo05g4193 228 Pfam Glutathione S-transferase, C-terminal domain 118 195 IPR004046 -
Amo05g4193 228 Pfam Glutathione S-transferase, N-terminal domain 16 75 IPR004045 -
Amo05g4193 228 SFLD Glutathione Transferase (cytosolic) 1 215 IPR040079 -
Amo05g4193 228 SFLD Main.3: Omega- and Tau-like 1 215 IPR045073 -
Amo05g4193 228 SUPERFAMILY Thioredoxin-like 4 107 IPR036249 -
Amo05g4193 228 CDD GST_C_Tau 90 215 IPR045074 GO:0004364|GO:0006749
Amo05g4193 228 SUPERFAMILY GST C-terminal domain-like 75 215 IPR036282 -
Amo05g4193 228 PANTHER GLUTATHIONE S-TRANSFERASE 1 225 - -
Amo05g4193 228 Gene3D - 86 222 - -
Amo05g4193 228 Gene3D Glutaredoxin 1 85 - -
Amo05g4193 228 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 212 IPR010987 -
Amo05g4193 228 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4193 Amo-Chr5 110820237 110823226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4193 3 213 Glutathione S-transferase Gene Family AT2G29420 49.763 1.46e-73 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4193 K00799 - gmx:547587 347.051