Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4186 AGTTTTGCAGATGCGTTTGGTGAGAATGGAAGGCCAGCATCAGGTGATGAAGGTGCCGTGCCTTGGAATGCTTCTCTGCAAATTGATCTCGAGTTGGTATCTTGGAAGGCTGTATCTGACATAACCAAGGATAAGAAGGTTCTCAAGAAGACCCTGAAGGAGGGAGAGGGATATGAATGTCCCAATGATGGAGCTGTGGTTCAAGATGGGACTGTTTTCGTGAAGAAGGGTCATGATGATGAGCAGCCATTTGAGTTCAAAATTGACGAGGAGCAAGTGATTGATGGACTTGATAAGGCTGTAATGAACATGAAGAAAGCGGAAGTTGCGTTGGTGACCATACATCCTGAATACGCTTTTGGCTCATCAGGGTCAACTCAGAAGAGTACATTAGTGCAATCCATTCTCAAGTAG 414 0.4517 SFADAFGENGRPASGDEGAVPWNASLQIDLELVSWKAVSDITKDKKVLKKTLKEGEGYECPNDGAVVQDGTVFVKKGHDDEQPFEFKIDEEQVIDGLDKAVMNMKKAEVALVTIHPEYAFGSSGSTQKSTLVQSILK* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4186 137 MobiDBLite consensus disorder prediction 1 20 - -
Amo05g4186 137 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 63 128 IPR001179 GO:0003755
Amo05g4186 137 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 55 137 IPR001179 GO:0003755
Amo05g4186 137 Gene3D - 37 135 IPR046357 GO:0003755
Amo05g4186 137 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP62 65 126 - -
Amo05g4186 137 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP62 5 63 - -
Amo05g4186 137 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 65 126 - -
Amo05g4186 137 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 5 63 - -
Amo05g4186 137 SUPERFAMILY FKBP-like 13 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4186 Amo-Chr5 110756936 110757464 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4186 6 132 Calmodulin-binding Proteins AT3G25230 67.647 1.46e-55 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4186 K09571 - ahf:112763143 216.083