Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4181 ATGATGGGCATGGAGGACGGTTGGCTGCAGAATACGCACAGAAGCATTTGCATGGGAATGTTATCTCAGCTGGATTACCACTTGGATGTAAAGGCAGCTAAAAGAGCGATACTTGATGGTTTTCGTAAAACCGATGAGTCTCTTCTTCAAGAAAGTTCTGAAGGGGGATGGCAGGATGGTGCCACAGCTGTCTGTGTCTGGGTATTGGGACAAAAAGTTTTCGTTGCAAACATAGGAGATGCCAAAGCAGTTTTGGCTCGGTCAGCTATAAGTGATGGATCCCAAGGTAATTCTGATGGAGCCCATGCACTAAAGGCCATTGTTTTGACGAGAGAGCACAAACCTATCTTCCCACAGGAACGTGCACGCATTCAGAAGGCTGGTGGTGTTGTAAGCTCAAATGGGAGATTGCAAGGGCGTCTAGAAATTTCTAGGGGTTTTGGAGACCGGCAGTTCAAAAAGGTGGGTTGTAGTGCAACCCCAGATATCCATTCTTTTGATCTTACTGAGAGAGAGCATTTCATCATTCTTGGCTGTGATGGCTTGTGGGGGGTATTTGGTCCCAGTGATGCTGTTGATTTTGTTCAGAAGTTATTGAATGAGGGGCTTAGTGCTGCAGCTGTGAGCCGCCGTCTTGTAAGGGAAGCTGTACGTGAGCGTCGCTGCAAAGATAACTGCACCGCAATTGTTATTGTATTCAAGCGCAGTTAA 711 0.4684 MMGMEDGWLQNTHRSICMGMLSQLDYHLDVKAAKRAILDGFRKTDESLLQESSEGGWQDGATAVCVWVLGQKVFVANIGDAKAVLARSAISDGSQGNSDGAHALKAIVLTREHKPIFPQERARIQKAGGVVSSNGRLQGRLEISRGFGDRQFKKVGCSATPDIHSFDLTEREHFIILGCDGLWGVFGPSDAVDFVQKLLNEGLSAAAVSRRLVREAVRERRCKDNCTAIVIVFKRS* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4181 236 CDD PP2Cc 34 233 IPR001932 -
Amo05g4181 236 PANTHER INTEGRIN-LINKED KINASE-ASSOCIATED SERINE/THREONINE PHOSPHATASE 2C 13 230 - -
Amo05g4181 236 SMART PP2C_4 2 231 IPR001932 -
Amo05g4181 236 Gene3D - 9 236 IPR036457 -
Amo05g4181 236 SUPERFAMILY PP2C-like 20 234 IPR036457 -
Amo05g4181 236 Pfam Protein phosphatase 2C 30 221 IPR001932 -
Amo05g4181 236 ProSiteProfiles PPM-type phosphatase domain profile. 1 233 IPR001932 -
Amo05g4181 236 PANTHER PROTEIN PHOSPHATASE 2C 13 230 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4181 Amo-Chr5 110734603 110739431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4181 28 185 PP2C-type Phosphatase Gene Family AT1G18030 75.316 7.32e-85 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4181 K17500 - pop:7453894 357.451