Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4142 ATGTGTTTATTATCTAATCATGTCTCAGATATTTATATTCCTTTATGTGGGATGGATGCATTGGACATAGAGAAGTGGCGATTCATAAGTCAAAGTCCTGAAAAATCAGTTGGGATCAGTTCAGTGCTTCTAGGAGTTATCCTAGTTGAAAGAGCAGCATTTGTTTTCCCTCTCTCATTCTTATCCAATTTGCTCCAAAAATCCCCACATGTGAAAATTGACTTGAAGCAACAAGTCACAATCTGGTGGTCTAGTCTCATGCGAGGTGCTGTTTCTATAGCAGTTGCTTACAACCAGGTGAAGTAA 306 0.3889 MCLLSNHVSDIYIPLCGMDALDIEKWRFISQSPEKSVGISSVLLGVILVERAAFVFPLSFLSNLLQKSPHVKIDLKQQVTIWWSSLMRGAVSIAVAYNQVK* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4142 101 PANTHER SODIUM/HYDROGEN EXCHANGER 3 8 99 - -
Amo05g4142 101 PANTHER SODIUM/HYDROGEN EXCHANGER 8 99 IPR018422 GO:0006812|GO:0015299|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4142 Amo-Chr5 109888500 109889230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4142 17 99 Antiporters AT3G05030 67.470 1.39e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4142 - - ahf:112802266 164.081