Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4138 ATGGGACTTAATGCCATGTTATTTGTTATTGTTGTTGTATTGTCATCCATGTTATTCATTCACCTGCTTGGGCACATTTTTGTTCATTGTTGTCTTGAAGATGGGACGGTTGTTTTGAAATCTGATGGGGTGGAGTTCACCGTGGAAGGTTATTTCTGTCCTGCATTGGCCAAGGCTGTGATGACAATGAAGAAGGGAGAGAACGTCATCTTGACCGTGAAGCCAGAATATGCATTTGGTGAGAATGGAAGACCAGCATCAGGTGATGAAGTGAAACTTGTTGGTAAGCTGCAAGATGGGACTGTTTTTGTGAAGAAGGGTGAGGATGATGAGCAGCCATTTGAGTTCAAAATTGACGAGGAGCAAGTGATTGATGGACTTGATAAAGCTGTAATGAACATTTAA 405 0.4173 MGLNAMLFVIVVVLSSMLFIHLLGHIFVHCCLEDGTVVLKSDGVEFTVEGYFCPALAKAVMTMKKGENVILTVKPEYAFGENGRPASGDEVKLVGKLQDGTVFVKKGEDDEQPFEFKIDEEQVIDGLDKAVMNI* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4138 134 SUPERFAMILY FKBP-like 91 133 - -
Amo05g4138 134 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP65 29 85 - -
Amo05g4138 134 SUPERFAMILY FKBP-like 30 87 - -
Amo05g4138 134 Gene3D - 25 87 IPR046357 GO:0003755
Amo05g4138 134 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP65 90 133 - -
Amo05g4138 134 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 29 85 - -
Amo05g4138 134 Gene3D - 88 134 IPR046357 GO:0003755
Amo05g4138 134 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 15 88 IPR001179 GO:0003755
Amo05g4138 134 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 90 133 - -
Amo05g4138 134 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 90 133 IPR001179 GO:0003755
Amo05g4138 134 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 29 84 IPR001179 GO:0003755
Amo05g4138 134 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 86 134 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4138 Amo-Chr5 109814780 109815867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4138 32 82 Calmodulin-binding Proteins AT3G25230 48.276 1.27e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4138 K09571 - gmx:100810243 152.525