Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4129 ATGCCAATTCTCTCATTTGTATCTCAGTGTTTCTTCTTCCCTAATGGTAGTGGAAGTAAACACCACACTTTACATCCAATTATTGGTTCTGAGGTGAAGGGGGGAAGCAAATTGGTGCCTCTGGATTCTGAGGAACCAAGTAGTGGTGATGATGAACAACATGTAGTGCCTCTGGATTCTAAGGTTCAAACAAGCTGGGATGAACCGGTGGTTCCTGTGATCTCTGATGAGTTACCAAGTGATCATGATCAAAATCAATCACTTTTGTTGGTTGATTCTGTGTACTGCCACATAAATGAGGTGTTTGAGTATTCTGAACTTGAAGAAGCCACCAACAATTTTGACCCTAGTAGGGAACTTGGATCTGGAGGATATGGGACAGTTTATTTTGGAATACTCAAAGATGGACGTCATGTGGCAATAAAGCAGTTGCACAAAGACATGCTGAGGAGTTTAAGGTTGCATGACGAGAATTCCGAGAGCAATGATAGAGTCACCAAGTTCTCAAACGAATTTGCCATCTTATCTCACTTGAAGCATGGAAATCTTGTCCAGCTATATGGCTGCACCTCTCCTCAGAGCCATGAAGTAATGCTTGTGCAAGAGTACATTCCCAATGGAACCGCTGCAGATCATCTTCTCAACAGGAGCTCTCCTCCGTGGTCTACGCGACTAAACATCGCCATACAGACTGCAGAAGCATTGGCTTATCTACACAGTTCTAGCATAATCCACCGCAATGTGAAAACTAGCAACATTCTGCTTGACATAAATTTGAATGCTAAAGTTGCAGACTTTGGATTATCGCGCCTTTTCCCAGAAGGTGTAACTCATGTTTCCACTGATCCTGCTGGGACTCCGGGTTATGTTGATCCAGAGTACTATGAGCATGGCCATCTTTCTGAGAAGAGCGATGTGTATAGTTTCGGAGTAATATTGCTTGAGCTGATAACATCCCTGCCAGCATATAGTGAGGACGATAGAGAGCCTTTTCTTTCCAACTTTGCCATGGTTAGAATAAGCTGTGGGAGACTCCAGAGTATTGTTGACCGAGATCTTGGATTTGAGTCAGATGATTGGAATACTAAAACAATTACCGCAGTGGCAGAGTTGGCGTGTAAGTGTCTTCAGAGCCAAAGTAAATTGAGACCTTCCATGGAAGAGGTGTTGAATAGCCTTGTGAGAATTAAAAGTTGTTGA 1200 0.4308 MPILSFVSQCFFFPNGSGSKHHTLHPIIGSEVKGGSKLVPLDSEEPSSGDDEQHVVPLDSKVQTSWDEPVVPVISDELPSDHDQNQSLLLVDSVYCHINEVFEYSELEEATNNFDPSRELGSGGYGTVYFGILKDGRHVAIKQLHKDMLRSLRLHDENSESNDRVTKFSNEFAILSHLKHGNLVQLYGCTSPQSHEVMLVQEYIPNGTAADHLLNRSSPPWSTRLNIAIQTAEALAYLHSSSIIHRNVKTSNILLDINLNAKVADFGLSRLFPEGVTHVSTDPAGTPGYVDPEYYEHGHLSEKSDVYSFGVILLELITSLPAYSEDDREPFLSNFAMVRISCGRLQSIVDRDLGFESDDWNTKTITAVAELACKCLQSQSKLRPSMEEVLNSLVRIKSC* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4129 399 ProSiteProfiles Protein kinase domain profile. 114 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4129 399 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 78 398 IPR044652 -
Amo05g4129 399 Pfam Protein kinase domain 117 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4129 399 Gene3D Transferase(Phosphotransferase) domain 1 204 399 - -
Amo05g4129 399 MobiDBLite consensus disorder prediction 35 55 - -
Amo05g4129 399 Gene3D Phosphorylase Kinase; domain 1 90 203 - -
Amo05g4129 399 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 78 398 - -
Amo05g4129 399 ProSitePatterns Protein kinases ATP-binding region signature. 120 142 IPR017441 GO:0005524
Amo05g4129 399 SUPERFAMILY Protein kinase-like (PK-like) 96 396 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4129 Amo-Chr5 109622641 109625832 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4129 101 398 Receptor kinase-like Gene Family AT1G25390 52.131 4.26e-99 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Amo05g4129 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4129 - - mtr:MTR_6g082700 429.869