Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4127 ATGAACAAGGTGTTGGATCCAAGACTTGGCTTCCAATCAGACCATAAAATCAAGCAGATGATAACTGCTGTAGCAGAGCTTGCACTTGAGTGCATGAATTCTCCACAAGAACTAAGGCCAAACATGGAACAAGTGCTAGAGATCCTCAATGGTATAAGAAAAGAGAGATTTGAAGCAAACTCAGAAAAAGCTTTTAAAATCTTCCACCATGCTGAACTTGAAGAAGCAACTAAACATTTTGACACTTGCCTTGGAAAGGGAGGGTTTGCCACTGTCTACTATGGAAAACTTAAGGATGGGCGCGAAATTGCAGTAAAACATTTCCACAACGAGACAGAAAAGTCCATCAAGCAATTCATGAAAGAAATAGAGATCTTAAGTCTCTTGCAGCATCAAAATTTGGTGTTACTTTATGGCGGCAGCTCTCGTCACAGGAAGAACCATCTTCTAGTGTATGAGTACATCTCCAACGGCACCCTTTCTAAACGTCTTCAAGGACCTTCCAGTGAAAAGTTATCATGGCTTACTAGATTGAACATTGCCATTGAAACTGCAACTGCATTAGTATATCTTCATGATTCAGGCATCATCCATCGCAATGTGAAAGGAAGCAACATTCTCTTGGATGAAAACTTGACTGTTAAGGTTGCGGATTTTGGACTCTCAAGGTCACTTCCGAGTTCTGTAACACATGTTTCAACCATACCAGTGGGAACTCACGCTTACATAGATCCAGATTACTATGAATCTGGAAGAGTCAGTGATAGAAGCGATGTCTACAGCTTTGGCGTGGTCTTGTTTGAGCTCATATCATCGAAACCACCTAGCTTGTTGGATGATGGAGAGAGTGTTACTCTAGCCAAGTTCGGAATCACTAAGATGTTAAACAATGCAATGGAGGAGCTGGTGGATCCAATTTTCAGGTTTGGTTCAGACCAAAAGTTGATGGAAATGATAGCAGCTTGTCCTAAAGATCTTAGACCTTCTATGAAACAGGTGCTGGAGACCCTAGAAGGAATAAAGAAGGGAACATGGGGATTCAACCAAATAACATAG 1056 0.4129 MNKVLDPRLGFQSDHKIKQMITAVAELALECMNSPQELRPNMEQVLEILNGIRKERFEANSEKAFKIFHHAELEEATKHFDTCLGKGGFATVYYGKLKDGREIAVKHFHNETEKSIKQFMKEIEILSLLQHQNLVLLYGGSSRHRKNHLLVYEYISNGTLSKRLQGPSSEKLSWLTRLNIAIETATALVYLHDSGIIHRNVKGSNILLDENLTVKVADFGLSRSLPSSVTHVSTIPVGTHAYIDPDYYESGRVSDRSDVYSFGVVLFELISSKPPSLLDDGESVTLAKFGITKMLNNAMEELVDPIFRFGSDQKLMEMIAACPKDLRPSMKQVLETLEGIKKGTWGFNQIT* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4127 351 PANTHER TYROSINE KINASE FAMILY PROTEIN 3 351 - -
Amo05g4127 351 SUPERFAMILY Protein kinase-like (PK-like) 63 341 IPR011009 -
Amo05g4127 351 ProSitePatterns Protein kinases ATP-binding region signature. 84 106 IPR017441 GO:0005524
Amo05g4127 351 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 3 351 IPR044652 -
Amo05g4127 351 ProSiteProfiles Protein kinase domain profile. 78 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4127 351 Gene3D Phosphorylase Kinase; domain 1 51 154 - -
Amo05g4127 351 Pfam Protein tyrosine and serine/threonine kinase 80 336 IPR001245 GO:0004672|GO:0006468
Amo05g4127 351 Gene3D Transferase(Phosphotransferase) domain 1 155 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4127 Amo-Chr5 109616818 109618312 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4127 3 55 Receptor kinase-like Gene Family AT1G25390 39.623 7.12e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Amo05g4127 PK_Tyr_Ser-Thr 3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4127 - - adu:107490529 624.394