Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4126 ATGCTAGTATTTGAATTTGTTTCCAATGGAACTCTGGCCGATCATCTTCATGGAAAGCGTAAGAAACAAGGCACTCTAGTACCCTGGCATACCAGATTGAACATAGCAATTGAGGCTGCAAGTGCATTGGCTTATCTTCATAATTCAGGAATTATTCACCGCGATATAAAATCCTCCAAAATTCTTTTGGATGATAACTTGTGCGTTAAGGTAGCCGATTTTGGCCTTTCGCGCATGCTTCCTTTGGTTGTTTCAACTTCAAAAGAGGCTGCTACTTTTGCTTCTCATGCCTCAACTGCTCCACAAGGAACAAATGGATATATAGACCCTGACTATTTTCAATTTCACAGGGTTTGTGACAAGAGTGATACTTATAGCTTTGGAGTGGTTTTAGCCGAGATTATATCTTCGTTGCCAGCGGTTGATGATACATGGAATCCATATGAGGTACCATTACTGTCTCACCTTGCCATGAACAAAATCCAAAATGAAGCATTGCATGAGTTGGTGGATCCATGCCTTGGTTTTCAACCAGACAATGAGATTGGAGAATCTATAACTGCTGTGGCTGAGTTGGCATTTCAGTGCCTGCAATGTCCTAAGGAACTAAGGCCCTCTATGAAGCAGGTGCTAGAGACTTTGCAGGGTATAAAGAAGGGAATATGGGGATTTCACCAAATAACATAG 687 0.4163 MLVFEFVSNGTLADHLHGKRKKQGTLVPWHTRLNIAIEAASALAYLHNSGIIHRDIKSSKILLDDNLCVKVADFGLSRMLPLVVSTSKEAATFASHASTAPQGTNGYIDPDYFQFHRVCDKSDTYSFGVVLAEIISSLPAVDDTWNPYEVPLLSHLAMNKIQNEALHELVDPCLGFQPDNEIGESITAVAELAFQCLQCPKELRPSMKQVLETLQGIKKGIWGFHQIT* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4126 228 Gene3D Transferase(Phosphotransferase) domain 1 7 221 - -
Amo05g4126 228 SUPERFAMILY Protein kinase-like (PK-like) 1 214 IPR011009 -
Amo05g4126 228 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 219 IPR044652 -
Amo05g4126 228 PIRSF ILK 1 226 - -
Amo05g4126 228 Pfam Protein tyrosine and serine/threonine kinase 1 214 IPR001245 GO:0004672|GO:0006468
Amo05g4126 228 ProSiteProfiles Protein kinase domain profile. 1 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4126 228 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4126 Amo-Chr5 109609714 109610942 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4126 1 218 Receptor kinase-like Gene Family AT1G25390 55.046 1.17e-72 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Amo05g4126 PK_Tyr_Ser-Thr 8.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4126 - - ahf:112802255 464.151