Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4121 ATGGATGAAAGACCGTGTGAAAATAAACACAAGCTTCAACAGTTCAAGAATGAAATCAAAGTCTTAAGTCAAATAAGCCATCAAAATCTTGTTTCGTTTTATGGCTACTGTTACCATGGATTGAATATAGCAATTGAGGCTGCAAGTGCATTGGCTTATCTTCACAATTCTGGCATTATTCGCCGTGATGTCGCAGATTTTGGCCTTTTGCACACTCTTCTGTTGGTTGTTTCAACTTCTTCACAAGAGGTTACTATTTACTATTTAATGGCTATATGGACACTCTGTATTTCCAATATTACAGGGTTAGTGACAAAAATCTTAACATCCATGAAAGCTTTGGATCTGAATAGAGATCAGCATGAAGTTAAAACTTAG 378 0.3598 MDERPCENKHKLQQFKNEIKVLSQISHQNLVSFYGYCYHGLNIAIEAASALAYLHNSGIIRRDVADFGLLHTLLLVVSTSSQEVTIYYLMAIWTLCISNITGLVTKILTSMKALDLNRDQHEVKT* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4121 125 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 41 64 IPR044652 -
Amo05g4121 125 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 8 37 IPR044652 -
Amo05g4121 125 SUPERFAMILY Protein kinase-like (PK-like) 8 88 IPR011009 -
Amo05g4121 125 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 41 64 - -
Amo05g4121 125 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 8 37 - -
Amo05g4121 125 Gene3D Phosphorylase Kinase; domain 1 2 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4121 Amo-Chr5 109534020 109534560 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4121 8 123 Receptor kinase-like Gene Family AT1G25390 29.775 5.32e-11 56.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Amo05g4121 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4121 - - ahf:112749145 118.242