Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4120 ATGAGGTTGTGTAGTGATCTCTTTCAAAGCTGCTTCCCCGGAACTTCTTCTGGCACATCTCCAAATGATTCAATTCAGATAAAGTGGCCAATCTTATCCTACCGGGAACTTGCAAAAGTTACAAATAATTTTGACCAATGTAATATGCTTGGAAAGATAGGCTTGGAGAAAGTTTACCATGGCAAAAAGAATGGGCGTGAGGTTGCAATTGAAAGATATTCCAATAATGAGATGCACATATTCCAGCAGTTCCTCTATGAAGATTTGATCTCAAATATCTTACCTCATAAGAATCTGGTGTCATTTCATGGTTGTGCCTTTCATCATAAGGAGTTCCTGCTAGCACATGAATACCTCTCAAATGGCACTCTTGCTTCTTATCTTCAACTTGAAATGTCACACAGCAGCACACTACATTGGCTCACTAGATTAGACATTGCAATTGATGCTGCAAATGCATTGAGCTATCTTCATTATCATGGCATCGTCCATCGCAATGTAAAATCCCACAATATTCTGCTAGACAAGAACCTTTGTGCTAAACTTGGTGGCTTACATTTGTCAAGGAAACTTCCAGAAGGAGTTTCAATCGATGATACCTATGTTACAAGTGATTTAGTAGGGACACGTGGTTACATAGACCCAGAATATGTATCATATGGCAGGGTTGGTGCCACAGTTGATGTTTACAGCTTTGGAGTGGTTTTGTGTGAGCTTATATCATCCAAACTCGCTAAGTATTGGAAAGGTTGCGAGGAAGAGAGTATTGCTACAATTTTAAGCAAAAAAATTGGAAGCCAAGATATGAACAAGGTGTTGGATCCAAGACTTGGCTTCCAATCAGACCATAAAATCAAGCAGATGATAACTGCTGTAGCAGAGCTTGCACTTGAGTGCATGAATTCTCCACAAGAACTAAGGCCAAACATGGAACAAGTGCTAGAGATCCTCAATGGTATAAGAAAAGAGAGATTTGAAGCAAACTCAGAAAAAGCTTTTAAAATCTTCCACCATGCTGAACTTGAAGAAGCAACTAAACATTTTGACACTTGCCTTGGAAAGGGAGGGTTTGCCACTGTCTACTATGGAAAACTTAAGGATGGGCGCGAAATTGCAGTAAAACGTTTCCACAACGAGACAGACAAGTCCATCAAGCAATTCATGAAAGAAATAGAGATCTTAAGTTTATTGCAGCATAAAAATTTGGTGTTACTTTATGGCTGCAGCTCTCGTCACAGCAAGAACCATCTTCTAGTATATGAGTACATCTCCAACGGCACCCTTTCTAAACATCTTCAAGGACCTTCCAGTGAAAAGTTATCATGGCTTACTAGATTGAACATTGCCATTGAAACTGCAACTGCATTAGTATATCTTCATGATTCAGGCATCATCCATCGTGATGTAAAAGGAAGCAACATTCTCTTGGATGAAAACTTGACTGTTAAGGTTGCGGATTTTGGACTCTCAAGGTCACTTCCGAGTTCTGTAACACATGTTTCAACCATACCAGTGGGAACTCACGCTTACATAGATCCAGATTACTATGAATCTGGAAGAGTCAGTGATAGAAGCGATGTCTACAGCTTTGGCGTGGTCTTGTTTGAGCTCATATCATCGAAACCACCTAGCTTGTTGGATGATGGAGAGAGTGTTACTCTAGCCAAGTTCGGAATCACTAAGATGTTAAACAATGCAATGGAGGAGCTGGTGGATCCAATTTTCAGGTTTGGTTCAGACCAAAAGTTGATGGAAATGATAGCAGCTGTGGCAGAGTTAGCATTTCAGTGTGTGCAGTGTCCTAAAGATCTTAGACCTTCTATGAAACAGGTGCTGGAGACCCTAGAAGGAATAAAGAAGGGAACATGGGGATTCAACCAAATAACATAG 1890 0.4032 MRLCSDLFQSCFPGTSSGTSPNDSIQIKWPILSYRELAKVTNNFDQCNMLGKIGLEKVYHGKKNGREVAIERYSNNEMHIFQQFLYEDLISNILPHKNLVSFHGCAFHHKEFLLAHEYLSNGTLASYLQLEMSHSSTLHWLTRLDIAIDAANALSYLHYHGIVHRNVKSHNILLDKNLCAKLGGLHLSRKLPEGVSIDDTYVTSDLVGTRGYIDPEYVSYGRVGATVDVYSFGVVLCELISSKLAKYWKGCEEESIATILSKKIGSQDMNKVLDPRLGFQSDHKIKQMITAVAELALECMNSPQELRPNMEQVLEILNGIRKERFEANSEKAFKIFHHAELEEATKHFDTCLGKGGFATVYYGKLKDGREIAVKRFHNETDKSIKQFMKEIEILSLLQHKNLVLLYGCSSRHSKNHLLVYEYISNGTLSKHLQGPSSEKLSWLTRLNIAIETATALVYLHDSGIIHRDVKGSNILLDENLTVKVADFGLSRSLPSSVTHVSTIPVGTHAYIDPDYYESGRVSDRSDVYSFGVVLFELISSKPPSLLDDGESVTLAKFGITKMLNNAMEELVDPIFRFGSDQKLMEMIAAVAELAFQCVQCPKDLRPSMKQVLETLEGIKKGTWGFNQIT* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4120 629 SUPERFAMILY Protein kinase-like (PK-like) 18 320 IPR011009 -
Amo05g4120 629 ProSiteProfiles Protein kinase domain profile. 44 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4120 629 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 28 629 IPR044652 -
Amo05g4120 629 Pfam Protein kinase domain 51 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4120 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Amo05g4120 629 Pfam Protein tyrosine and serine/threonine kinase 348 615 IPR001245 GO:0004672|GO:0006468
Amo05g4120 629 ProSiteProfiles Protein kinase domain profile. 346 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4120 629 SMART serkin_6 44 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4120 629 SMART serkin_6 346 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4120 629 Gene3D Transferase(Phosphotransferase) domain 1 423 623 - -
Amo05g4120 629 PANTHER TYROSINE KINASE FAMILY PROTEIN 28 629 - -
Amo05g4120 629 Gene3D Phosphorylase Kinase; domain 1 331 422 - -
Amo05g4120 629 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524
Amo05g4120 629 SUPERFAMILY Protein kinase-like (PK-like) 331 619 IPR011009 -
Amo05g4120 629 Gene3D Phosphorylase Kinase; domain 1 19 118 - -
Amo05g4120 629 Gene3D Transferase(Phosphotransferase) domain 1 119 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4120 Amo-Chr5 109528919 109532529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4120 335 619 Receptor kinase-like Gene Family AT1G25390 55.326 4.35e-99 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Amo05g4120 PK_Tyr_Ser-Thr 5.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4120 - - gmx:100801413 840.491