Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4114 ATGCTCACAAAAAAGGTTCTTATCTATGAGTTTATGTCCAATGGTTCCCTTGACAATTTTATTTACAAAAAGGACCCTAAGAGTACTCCACTCTTGAGTTGGGATAATTTGTATCAAATTTCCATAGGGATTGCTAGAGGATTGGAGTATTTGCATAGAGGATGCAACATTCGAATTTTACATTTTGACATAAAACCACATAACATTCTTTTGGATGAAAACTTTTGTCCTAAGATATCAGATTTCGGACTAGCAAAGCTTTGTCCTAGAAAAGAAAGTCATATTCCCATGTCCGAAACCAGAGGAACAATTGGGTATATAGCTCCAGAAGTGTGGAACAGACATTTTGATAGAGTTTCACATAAATCTGATGTTTATAGTTATGGAATGATGCTTCTAGAAATGGTAGGAATGAAGGAGAAGAACATAATTGCAGAGACAAGTCAAACAAGCGAGATGTACTTCCCTGATTGGATATACAAAAGTCTTGAACAAGGCACTAAGGTAGGACCTAACGACGAAGAGTTATCAATGGAGGAAAATGATGTTGTTAAGAAAATGACAGTAGTGGGTTTATGGTGCATTCAACCAATTCCAAGTGATAGACCAACAATGAGTAAAGTTGTAGAAATGTTGGAAGGCAGTATGAATTCCCTGGAAATTCCACCAAGAGGTCTGTCTTCTCCAATAAGAGTGGTGATAGAATCTTCTTCTATTGTATCGGTTGTAGAATCTTCTACTGGTGTAGAATCTTCTATTGCATCAAACACACATTATAACCTGAATGTTTTCACTGAAAACAAAAATGTCAGCTAG 816 0.3627 MLTKKVLIYEFMSNGSLDNFIYKKDPKSTPLLSWDNLYQISIGIARGLEYLHRGCNIRILHFDIKPHNILLDENFCPKISDFGLAKLCPRKESHIPMSETRGTIGYIAPEVWNRHFDRVSHKSDVYSYGMMLLEMVGMKEKNIIAETSQTSEMYFPDWIYKSLEQGTKVGPNDEELSMEENDVVKKMTVVGLWCIQPIPSDRPTMSKVVEMLEGSMNSLEIPPRGLSSPIRVVIESSSIVSVVESSTGVESSIASNTHYNLNVFTENKNVS* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4114 271 Gene3D Transferase(Phosphotransferase) domain 1 12 221 - -
Amo05g4114 271 SMART serkin_6 3 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4114 271 Pfam Protein kinase domain 6 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo05g4114 271 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 237 - -
Amo05g4114 271 ProSitePatterns Serine/Threonine protein kinases active-site signature. 59 71 IPR008271 GO:0004672|GO:0006468
Amo05g4114 271 PANTHER RUST RESISTANCE KINASE LR10-RELATED 3 237 IPR045874 GO:0004672
Amo05g4114 271 SUPERFAMILY Protein kinase-like (PK-like) 5 213 IPR011009 -
Amo05g4114 271 ProSiteProfiles Protein kinase domain profile. 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4114 Amo-Chr5 109475944 109476759 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4114 3 239 Receptor kinase-like Gene Family AT5G39030 55.649 2.60e-92 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Amo05g4114 Pkinase 1.2e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4114 - - ahf:112751085 489.574