Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4093 ATGGCGGCGAAAAGGTTTTTGGATGATTCTGATGATCGAGACCAAGATAAGCCAAACGACAAACGGTTTAGATCTAATAGACCTACTTTGGCTTCGGTAATAACCGAAGTTGTTATGGTGAAAAACTTGCAAACCTTGTTTACCGTAGCCTTGGAACCTGTGCTCAAGAGAGTGGTGAGTGAAGAGGTTGATAGAGCGATGAGGCAATGGTGTTCTTGTTCTTCGTCAAGGTCCTTAACAAGGTCACCATCATTGAGAATCAAAGCATTTGACGATGATCAACCATCATCAACCTTGCAACTAGTCTTCAGCAAGAGGCTATCCCTTCCAATCTTCACCGGAAGCCGAATCCTCGATGTCGAAGGCAACCCTATAAGCATACTTCTCATGGACAAGAGCAGTGGCCAGATGGTTCCAACAAGCCTCCCACATCCAATCAAGCTCGAACTCCTCGTGCTCGACGGCGATTTCCCCCTTTCTGATAATGACAACTCTTCTTCATCTTCTTCATCTTCTCGTGGTTGGAGTAGTGAAGAATTCAATAGCCGCATAGTGAAGGAGAGAACTGGCAAGAGACCTTTGCTTGCCGGAGAGTTGAACCTCACCATGAGGGATGGCATTGCACCAACTGGGGACATTGAGTTCACCGATAATAGTAGCTGGATTCGCAGCCGGAAGTTCCGGGTTGCCGTTAGGGTGGCTCCGGGGACTAACCACCATTCTCTTGCAATTCGAGAAGGCATTACTGAAGCTTTTGTTGTCAAGGATCACCGTGGAGAATTGTACAAAAAACATCACCCACCAATGCTAAATGACGAAGTGTGGCGGCTAGAAAAGATTGGAAAAGATGGAGCTTTCCACAAAAAATTGAGTTCAGAAGGGATCAAAACAGTTCAAGACTTTCTCAAACTATCAGTTATTGATCCTCATAGGCTAAGAAAGATTTTGGGCATTGGGATGTCAGATAAAATGTGGGAAGTGACAATCAAGCATGCAAAGACTTGTGAAATGGGAAGCAAGATCTACATCTACCGTGGCCCTCATTTCACTCTTTTTCTTAATCCAATTTGCCAATTGATTAAAGCTGATGTCAATGGCCACACATTTCCTACCAAAGAGCTTACCAATTTGAATAGGGCTTATATAGAGAAGTTGGTGAGAGAAGCATACGCTAAATGGCAAAACTTGGAGGAATTTGATGGGGTTTTGAATGATAACATTGCTTTGTTAACCCAAGGTGATGCAAATATGGAGCAATATCAAAATAATCATCCAGGTTCGGTGGTAACATATGATAGCAACGATTATTATGGTGACAAATCCACTGCCAGCTATGTACCGAGTAATAACATCAATGATAATAGTGCACTAATAATGGGGTCCATGGAGTGGTCCCTGAATAATAGTAACCCAGGATACACCACAGCATCATTCACCAATGGATTTCCCTATGGATTTTCATCAGGATCTCAATCGGACGGTGATATAACACCCACTTCAGGTTGTGTCATTGACGAGGCTCCAAGGAGACATATTTAG 1539 0.434 MAAKRFLDDSDDRDQDKPNDKRFRSNRPTLASVITEVVMVKNLQTLFTVALEPVLKRVVSEEVDRAMRQWCSCSSSRSLTRSPSLRIKAFDDDQPSSTLQLVFSKRLSLPIFTGSRILDVEGNPISILLMDKSSGQMVPTSLPHPIKLELLVLDGDFPLSDNDNSSSSSSSSRGWSSEEFNSRIVKERTGKRPLLAGELNLTMRDGIAPTGDIEFTDNSSWIRSRKFRVAVRVAPGTNHHSLAIREGITEAFVVKDHRGELYKKHHPPMLNDEVWRLEKIGKDGAFHKKLSSEGIKTVQDFLKLSVIDPHRLRKILGIGMSDKMWEVTIKHAKTCEMGSKIYIYRGPHFTLFLNPICQLIKADVNGHTFPTKELTNLNRAYIEKLVREAYAKWQNLEEFDGVLNDNIALLTQGDANMEQYQNNHPGSVVTYDSNDYYGDKSTASYVPSNNINDNSALIMGSMEWSLNNSNPGYTTASFTNGFPYGFSSGSQSDGDITPTSGCVIDEAPRRHI* 513
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4093 512 MobiDBLite consensus disorder prediction 1 24 - -
Amo05g4093 512 PANTHER PROTEIN, PUTATIVE-RELATED 1 504 - -
Amo05g4093 512 Pfam Calmodulin binding protein C-terminal domain 340 399 IPR046829 -
Amo05g4093 512 Pfam Calmodulin binding protein-like N-terminal domain 99 257 IPR046831 -
Amo05g4093 512 MobiDBLite consensus disorder prediction 489 512 - -
Amo05g4093 512 PANTHER OS02G0177800 PROTEIN 1 504 IPR012416 GO:0005516
Amo05g4093 512 Pfam Calmodulin binding protein central domain 269 335 IPR046830 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Amo05g4093 Amo-Chr5 109226744 109231767 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4093 3 401 Calmodulin-binding Proteins AT5G57580 47.264 6.95e-114 349
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4093 - - aip:107644281 964.911