Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g4088 ATGATAATTTACTATATTTTTTTTGCTATATCATCCTCTTCATTGCCTCCAGCTCCAGAACATGAATCAGTGGTATCAGTTTTTGAGAGCAAACTGAATAGGCTTCACACAACACATTCTTGGAATTTTCTTGGATTAAACTCTACCTACACATCACTCTCCTTTGTCCCTTCTCCTCCACAGCCCATTTACTTTGAGGATGCAGTCAGTGTTGCTACTGCCTGCAATGTTGCTCCTTGGATTCTCACTGTTGCTGCTAGCACCCTCGATATCCACCTTGAAAATTCAAAAGTTTTGAAGGTGAACTCAAAGGCACAAAATGGTCTGTCTTTGAATCCAATAAAAATGGACAATTGGCATGCTTTGATATATGCAAGTGCAGCCGCAGCACCAGGAGTTTCAGCAACAAATGCAAGCTTATATAAGAACAATACTCTAGATCGTAGCTTGATAAAGGACAAAATTGTGATCTGTACAATTGAGAAAGTCACTGAGAACCGAAGACTGAAGGCTATGGTAATAAAGGAAGGTGGAGGAGTTGGAATGATACTTATTGATCACAATACCAGAGATGTTGGCTTTGAGTTTGTGATCCCAGCCACTCTCATTGGTCAGGATGCCTTAGAGGACCTTCAATCATACATCAACACAGAGAGGTCAGTTTTAAACTACCTTAACTTGCACCATTCATTCAATTCTTATCTAAGCCCCACTCTCATGGTTGCCTCAGGAATCCCATTGCTAGAATCCATCCAACAAGAACTGTTCTTGATACCAAACCTGTACCAGAAGTGGCAGCTTTTTCCTCCATGGGGCCAAATGTAG 825 0.4109 MIIYYIFFAISSSSLPPAPEHESVVSVFESKLNRLHTTHSWNFLGLNSTYTSLSFVPSPPQPIYFEDAVSVATACNVAPWILTVAASTLDIHLENSKVLKVNSKAQNGLSLNPIKMDNWHALIYASAAAAPGVSATNASLYKNNTLDRSLIKDKIVICTIEKVTENRRLKAMVIKEGGGVGMILIDHNTRDVGFEFVIPATLIGQDALEDLQSYINTERSVLNYLNLHHSFNSYLSPTLMVASGIPLLESIQQELFLIPNLYQKWQLFPPWGQM* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g4088 274 Gene3D - 89 227 - -
Amo05g4088 274 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 73 217 IPR045051 -
Amo05g4088 274 Pfam PA domain 141 211 IPR003137 -
Amo05g4088 274 PANTHER PEPTIDASE S8, SUBTILISIN-RELATED PROTEIN-RELATED 73 217 - -
Amo05g4088 274 PANTHER PEPTIDASE S8, SUBTILISIN-RELATED PROTEIN-RELATED 20 47 - -
Amo05g4088 274 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 47 IPR045051 -
Amo05g4088 274 CDD PA_subtilisin_like 90 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g4088 Amo-Chr5 109152270 109154567 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g4088 67 215 Subtilisin-like Serine Gene Family AT5G45640 33.544 1.46e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo05g4088 - - ahf:112725549 330.872